RNA–Protein interactions for RNA: ENST00000567645.2

TRAF7-204, Transcript of TNF receptor associated factor 7, humanhuman

TSL 5

Gene TRAF7, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-204ENST00000567645 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
TRAF7-204ENST00000567645 ABCC9O60706 1549 aa32.25■■■□□ 2.75
TRAF7-204ENST00000567645 CCDC180Q9P1Z9 1646 aa32.03■■■□□ 2.72
TRAF7-204ENST00000567645 DNAJC5BQ9UF47 199 aa30.58■■■□□ 2.49
TRAF7-204ENST00000567645 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
TRAF7-204ENST00000567645 NACADO15069 1562 aa30.38■■■□□ 2.45
TRAF7-204ENST00000567645 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
TRAF7-204ENST00000567645 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.4
TRAF7-204ENST00000567645 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
TRAF7-204ENST00000567645 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
TRAF7-204ENST00000567645 BICRAQ9NZM4 1560 aa29.8■■■□□ 2.36
TRAF7-204ENST00000567645 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
TRAF7-204ENST00000567645 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.32
TRAF7-204ENST00000567645 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
TRAF7-204ENST00000567645 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
TRAF7-204ENST00000567645 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
TRAF7-204ENST00000567645 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
TRAF7-204ENST00000567645 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
TRAF7-204ENST00000567645 DNAJC5Q9H3Z4 198 aa28.15■■■□□ 2.1
TRAF7-204ENST00000567645 NCAPD3P42695 1498 aa28.14■■■□□ 2.09
TRAF7-204ENST00000567645 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
TRAF7-204ENST00000567645 CUX2O14529 1486 aa27.86■■■□□ 2.05
TRAF7-204ENST00000567645 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
TRAF7-204ENST00000567645 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
TRAF7-204ENST00000567645 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
TRAF7-204ENST00000567645 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
TRAF7-204ENST00000567645 NESP48681 1621 aa27.69■■■□□ 2.02
TRAF7-204ENST00000567645 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
TRAF7-204ENST00000567645 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
TRAF7-204ENST00000567645 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
TRAF7-204ENST00000567645 MROH2BQ7Z745 1585 aa27.53■■■□□ 2
TRAF7-204ENST00000567645 LAMC3Q9Y6N6 1575 aa27.42■■□□□ 1.98
TRAF7-204ENST00000567645 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.98
TRAF7-204ENST00000567645 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
TRAF7-204ENST00000567645 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
TRAF7-204ENST00000567645 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
TRAF7-204ENST00000567645 WIZO95785 1651 aa27.17■■□□□ 1.94
TRAF7-204ENST00000567645 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
TRAF7-204ENST00000567645 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
TRAF7-204ENST00000567645 WDR62O43379 1518 aa27■■□□□ 1.91
TRAF7-204ENST00000567645 CFTRP13569 1480 aa26.9■■□□□ 1.9
TRAF7-204ENST00000567645 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
TRAF7-204ENST00000567645 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
TRAF7-204ENST00000567645 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
TRAF7-204ENST00000567645 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
TRAF7-204ENST00000567645 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.87
TRAF7-204ENST00000567645 OSCARQ8IYS5 282 aa26.62■■□□□ 1.85
TRAF7-204ENST00000567645 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
TRAF7-204ENST00000567645 PRDM2Q13029 1718 aa26.44■■□□□ 1.82
TRAF7-204ENST00000567645 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
TRAF7-204ENST00000567645 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
TRAF7-204ENST00000567645 TOPBP1Q92547 1522 aa26.36■■□□□ 1.81
TRAF7-204ENST00000567645 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
TRAF7-204ENST00000567645 ABCC8Q09428 1581 aa26.28■■□□□ 1.8
TRAF7-204ENST00000567645 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
TRAF7-204ENST00000567645 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
TRAF7-204ENST00000567645 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
TRAF7-204ENST00000567645 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
TRAF7-204ENST00000567645 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
TRAF7-204ENST00000567645 AQRO60306 1485 aaKnown RBP eCLIP26.15■■□□□ 1.781e-6■■■■□ 20.6
TRAF7-204ENST00000567645 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.78
TRAF7-204ENST00000567645 ARHGEF11O15085 1522 aa26.14■■□□□ 1.77
TRAF7-204ENST00000567645 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
TRAF7-204ENST00000567645 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
TRAF7-204ENST00000567645 CYB5RLQ6IPT4 315 aa25.99■■□□□ 1.75
TRAF7-204ENST00000567645 SOGA1O94964 1423 aa25.98■■□□□ 1.75
TRAF7-204ENST00000567645 CHD1O14646 1710 aa25.97■■□□□ 1.75
TRAF7-204ENST00000567645 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
TRAF7-204ENST00000567645 FBLN2P98095 1184 aa25.93■■□□□ 1.74
TRAF7-204ENST00000567645 ARAP1Q96P48 1450 aa25.89■■□□□ 1.73
TRAF7-204ENST00000567645 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
TRAF7-204ENST00000567645 CUX1P39880 1505 aa25.85■■□□□ 1.73
TRAF7-204ENST00000567645 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
TRAF7-204ENST00000567645 SNAPC4Q5SXM2 1469 aa25.81■■□□□ 1.72
TRAF7-204ENST00000567645 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
TRAF7-204ENST00000567645 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
TRAF7-204ENST00000567645 CHMP7Q8WUX9 453 aaPredicted RBP25.75■■□□□ 1.71
TRAF7-204ENST00000567645 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
TRAF7-204ENST00000567645 TRHP20396 242 aaPredicted RBP25.68■■□□□ 1.7
TRAF7-204ENST00000567645 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
TRAF7-204ENST00000567645 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
TRAF7-204ENST00000567645 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
TRAF7-204ENST00000567645 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
TRAF7-204ENST00000567645 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
TRAF7-204ENST00000567645 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
TRAF7-204ENST00000567645 PBRM1Q86U86 1689 aa25.53■■□□□ 1.68
TRAF7-204ENST00000567645 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
TRAF7-204ENST00000567645 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
TRAF7-204ENST00000567645 GRIN2AQ12879 1464 aa25.41■■□□□ 1.66
TRAF7-204ENST00000567645 NUP160Q12769 1436 aa25.38■■□□□ 1.65
TRAF7-204ENST00000567645 ERCC6L2Q5T890 1561 aa25.36■■□□□ 1.65
TRAF7-204ENST00000567645 ADAMTS12P58397 1594 aa25.33■■□□□ 1.65
TRAF7-204ENST00000567645 CEP170Q5SW79 1584 aa25.32■■□□□ 1.64
TRAF7-204ENST00000567645 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
TRAF7-204ENST00000567645 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
TRAF7-204ENST00000567645 SHROOM2Q13796 1616 aa25.24■■□□□ 1.63
TRAF7-204ENST00000567645 JPH4Q96JJ6 628 aa25.15■■□□□ 1.62
TRAF7-204ENST00000567645 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
TRAF7-204ENST00000567645 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
TRAF7-204ENST00000567645 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms