RNA–Protein interactions for RNA: ENST00000569686.5

TRAF7-206, Transcript of TNF receptor associated factor 7, humanhuman

TSL 2

Gene TRAF7, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-206ENST00000569686 NISCHQ9Y2I1 1504 aa62.35■■■■■ 7.57
TRAF7-206ENST00000569686 CCDC180Q9P1Z9 1646 aa55.25■■■■■ 6.44
TRAF7-206ENST00000569686 ABCC9O60706 1549 aa54.14■■■■■ 6.26
TRAF7-206ENST00000569686 DCAF8L2P0C7V8 631 aa52.25■■■■■ 5.95
TRAF7-206ENST00000569686 RB1CC1Q8TDY2 1594 aa52.06■■■■■ 5.92
TRAF7-206ENST00000569686 NACADO15069 1562 aa52.04■■■■■ 5.92
TRAF7-206ENST00000569686 ZCCHC6Q5VYS8 1495 aaKnown RBP51.93■■■■■ 5.9
TRAF7-206ENST00000569686 MYO15BQ96JP2 1530 aa51.74■■■■■ 5.87
TRAF7-206ENST00000569686 DCAF1Q9Y4B6 1507 aa51.57■■■■■ 5.85
TRAF7-206ENST00000569686 PABPN1Q86U42 306 aaKnown RBP eCLIP50.69■■■■■ 5.71
TRAF7-206ENST00000569686 UNC13AQ9UPW8 1703 aa50.68■■■■■ 5.7
TRAF7-206ENST00000569686 SCRIBQ14160 1630 aa50.51■■■■■ 5.68
TRAF7-206ENST00000569686 BICRAQ9NZM4 1560 aa50.43■■■■■ 5.66
TRAF7-206ENST00000569686 SHROOM4Q9ULL8 1493 aa49.95■■■■■ 5.59
TRAF7-206ENST00000569686 DNAJC5BQ9UF47 199 aa49.64■■■■■ 5.54
TRAF7-206ENST00000569686 EIF4G1Q04637 1599 aaKnown RBP49.13■■■■■ 5.46
TRAF7-206ENST00000569686 CC2D2AQ9P2K1 1620 aa48.9■■■■■ 5.42
TRAF7-206ENST00000569686 CECR2Q9BXF3 1484 aa48.63■■■■■ 5.38
TRAF7-206ENST00000569686 BAZ1AQ9NRL2 1556 aaPredicted RBP48.3■■■■■ 5.32
TRAF7-206ENST00000569686 SMARCA4P51532 1647 aa48.3■■■■■ 5.32
TRAF7-206ENST00000569686 ATAD2BQ9ULI0 1458 aa48.1■■■■■ 5.29
TRAF7-206ENST00000569686 NCAPD3P42695 1498 aa48.06■■■■■ 5.28
TRAF7-206ENST00000569686 MROH2BQ7Z745 1585 aa48.05■■■■■ 5.28
TRAF7-206ENST00000569686 SMARCA2P51531 1590 aa48.01■■■■■ 5.28
TRAF7-206ENST00000569686 PEG3Q9GZU2 1588 aa47.81■■■■■ 5.24
TRAF7-206ENST00000569686 HMGXB3Q12766 1538 aa47.76■■■■■ 5.24
TRAF7-206ENST00000569686 BAZ1BQ9UIG0 1483 aaKnown RBP47.71■■■■■ 5.23
TRAF7-206ENST00000569686 RSF1Q96T23 1441 aaPredicted RBP47.59■■■■■ 5.21
TRAF7-206ENST00000569686 WIZO95785 1651 aa47.48■■■■■ 5.19
TRAF7-206ENST00000569686 TOP2AP11388 1531 aaKnown RBP47.02■■■■■ 5.12
TRAF7-206ENST00000569686 NESP48681 1621 aa46.85■■■■■ 5.09
TRAF7-206ENST00000569686 LAMC3Q9Y6N6 1575 aa46.71■■■■■ 5.07
TRAF7-206ENST00000569686 CADPSQ9ULU8 1353 aa46.71■■■■■ 5.07
TRAF7-206ENST00000569686 ERCC6Q03468 1493 aa46.68■■■■■ 5.06
TRAF7-206ENST00000569686 SUPT5HO00267 1087 aaKnown RBP46.57■■■■■ 5.05
TRAF7-206ENST00000569686 CCDC88BA6NC98 1476 aa46.52■■■■■ 5.04
TRAF7-206ENST00000569686 PDS5BQ9NTI5 1447 aa46.5■■■■■ 5.03
TRAF7-206ENST00000569686 CFTRP13569 1480 aa46.4■■■■■ 5.02
TRAF7-206ENST00000569686 KIF21AQ7Z4S6 1674 aa46.17■■■■■ 4.98
TRAF7-206ENST00000569686 FANCD2Q9BXW9 1451 aa46.13■■■■■ 4.98
TRAF7-206ENST00000569686 CUX2O14529 1486 aa46.1■■■■■ 4.97
TRAF7-206ENST00000569686 CEP164Q9UPV0 1460 aa46.06■■■■■ 4.96
TRAF7-206ENST00000569686 THOC2Q8NI27 1593 aaKnown RBP46.02■■■■■ 4.96
TRAF7-206ENST00000569686 MRC2Q9UBG0 1479 aa45.96■■■■■ 4.95
TRAF7-206ENST00000569686 PRDM2Q13029 1718 aa45.83■■■■■ 4.93
TRAF7-206ENST00000569686 WDR62O43379 1518 aa45.75■■■■■ 4.91
TRAF7-206ENST00000569686 URB2Q14146 1524 aaKnown RBP45.63■■■■■ 4.9
TRAF7-206ENST00000569686 ABCC8Q09428 1581 aa45.42■■■■■ 4.86
TRAF7-206ENST00000569686 TOPBP1Q92547 1522 aa45.38■■■■■ 4.86
TRAF7-206ENST00000569686 DNMBPQ6XZF7 1577 aa45.3■■■■■ 4.84
TRAF7-206ENST00000569686 IFT140Q96RY7 1462 aa45.1■■■■■ 4.81
TRAF7-206ENST00000569686 CUX1P39880 1505 aa45.06■■■■■ 4.8
TRAF7-206ENST00000569686 POLA1P09884 1462 aaPredicted RBP45■■■■■ 4.79
TRAF7-206ENST00000569686 FGD5Q6ZNL6 1462 aa44.91■■■■■ 4.78
TRAF7-206ENST00000569686 SOGA1O94964 1423 aa44.9■■■■■ 4.78
TRAF7-206ENST00000569686 WRNQ14191 1432 aaPredicted RBP eCLIP44.87■■■■■ 4.77
TRAF7-206ENST00000569686 ZNF608Q9ULD9 1512 aaPredicted RBP44.86■■■■■ 4.77
TRAF7-206ENST00000569686 RAD54L2Q9Y4B4 1467 aa44.84■■■■■ 4.77
TRAF7-206ENST00000569686 TARBP1Q13395 1621 aaKnown RBP44.81■■■■■ 4.76
TRAF7-206ENST00000569686 AQRO60306 1485 aaKnown RBP eCLIP44.67■■■■■ 4.742e-6■■■■□ 21.3
TRAF7-206ENST00000569686 TOP2BQ02880 1626 aa44.67■■■■■ 4.74
TRAF7-206ENST00000569686 SYNJ1O43426 1573 aa44.66■■■■■ 4.74
TRAF7-206ENST00000569686 DNAJC5Q9H3Z4 198 aa44.66■■■■■ 4.74
TRAF7-206ENST00000569686 TDRD9Q8NDG6 1382 aaKnown RBP44.64■■■■■ 4.74
TRAF7-206ENST00000569686 BIVM-ERCC5R4GMW8 1640 aa44.62■■■■■ 4.73
TRAF7-206ENST00000569686 EIF4G3O43432 1585 aaKnown RBP44.61■■■■■ 4.73
TRAF7-206ENST00000569686 ABCA10Q8WWZ4 1543 aa44.49■■■■■ 4.71
TRAF7-206ENST00000569686 WDR97A6NE52 1622 aa44.46■■■■■ 4.71
TRAF7-206ENST00000569686 GAPVD1Q14C86 1478 aa44.34■■■■■ 4.69
TRAF7-206ENST00000569686 OSCARQ8IYS5 282 aa44.34■■■■■ 4.69
TRAF7-206ENST00000569686 GRIN2BQ13224 1484 aa44.33■■■■■ 4.69
TRAF7-206ENST00000569686 SNAPC4Q5SXM2 1469 aa44.23■■■■■ 4.67
TRAF7-206ENST00000569686 ABCA5Q8WWZ7 1642 aa44.21■■■■■ 4.67
TRAF7-206ENST00000569686 FBLN2P98095 1184 aa44.21■■■■■ 4.67
TRAF7-206ENST00000569686 MAGI1Q96QZ7 1491 aaPredicted RBP44.17■■■■■ 4.66
TRAF7-206ENST00000569686 CHMP7Q8WUX9 453 aaPredicted RBP44.1■■■■■ 4.65
TRAF7-206ENST00000569686 PBRM1Q86U86 1689 aa44.07■■■■■ 4.65
TRAF7-206ENST00000569686 SYNJ2O15056 1496 aa44■■■■■ 4.63
TRAF7-206ENST00000569686 TRIM41Q8WV44 630 aa43.99■■■■■ 4.63
TRAF7-206ENST00000569686 CHD1O14646 1710 aa43.97■■■■■ 4.63
TRAF7-206ENST00000569686 KIF27Q86VH2 1401 aa43.95■■■■■ 4.63
TRAF7-206ENST00000569686 ERICH3Q5RHP9 1530 aa43.94■■■■■ 4.63
TRAF7-206ENST00000569686 FHAD1B1AJZ9 1412 aa43.85■■■■■ 4.61
TRAF7-206ENST00000569686 ADAMTS12P58397 1594 aa43.8■■■■■ 4.6
TRAF7-206ENST00000569686 IGF1RP08069 1367 aa43.78■■■■■ 4.6
TRAF7-206ENST00000569686 GRIN2AQ12879 1464 aa43.72■■■■■ 4.59
TRAF7-206ENST00000569686 CLASP1Q7Z460 1538 aa43.58■■■■■ 4.57
TRAF7-206ENST00000569686 RUSC2Q8N2Y8 1516 aa43.53■■■■■ 4.56
TRAF7-206ENST00000569686 NUP160Q12769 1436 aa43.53■■■■■ 4.56
TRAF7-206ENST00000569686 CARMIL1Q5VZK9 1371 aa43.53■■■■■ 4.56
TRAF7-206ENST00000569686 CUL7Q14999 1698 aa43.51■■■■■ 4.56
TRAF7-206ENST00000569686 CHIC1Q5VXU3 224 aa43.49■■■■■ 4.55
TRAF7-206ENST00000569686 ARHGEF11O15085 1522 aa43.48■■■■■ 4.55
TRAF7-206ENST00000569686 CEP170Q5SW79 1584 aa43.45■■■■■ 4.55
TRAF7-206ENST00000569686 RIMBP3CA6NJZ7 1639 aa43.43■■■■■ 4.54
TRAF7-206ENST00000569686 RIMBP3BA6NNM3 1639 aa43.43■■■■■ 4.54
TRAF7-206ENST00000569686 RIMBP3Q9UFD9 1639 aa43.43■■■■■ 4.54
TRAF7-206ENST00000569686 RAPGEF2Q9Y4G8 1499 aa43.24■■■■■ 4.51
TRAF7-206ENST00000569686 CYB5RLQ6IPT4 315 aa43.21■■■■■ 4.51
TRAF7-206ENST00000569686 JPH4Q96JJ6 628 aa43.2■■■■■ 4.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms