RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 NISCHQ9Y2I1 1504 aa45.23■■■■■ 4.83
TRAF7-202ENST00000564067 ABCC9O60706 1549 aa41.56■■■■■ 4.24
TRAF7-202ENST00000564067 CCDC180Q9P1Z9 1646 aa40.9■■■■■ 4.14
TRAF7-202ENST00000564067 DNAJC5BQ9UF47 199 aa39.61■■■■□ 3.93
TRAF7-202ENST00000564067 RB1CC1Q8TDY2 1594 aa39.32■■■■□ 3.88
TRAF7-202ENST00000564067 NACADO15069 1562 aa38.89■■■■□ 3.82
TRAF7-202ENST00000564067 PABPN1Q86U42 306 aaKnown RBP eCLIP38.6■■■■□ 3.77
TRAF7-202ENST00000564067 DCAF8L2P0C7V8 631 aa38.52■■■■□ 3.76
TRAF7-202ENST00000564067 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
TRAF7-202ENST00000564067 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
TRAF7-202ENST00000564067 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
TRAF7-202ENST00000564067 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
TRAF7-202ENST00000564067 CECR2Q9BXF3 1484 aa37.57■■■■□ 3.6
TRAF7-202ENST00000564067 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
TRAF7-202ENST00000564067 DCAF1Q9Y4B6 1507 aa37.38■■■■□ 3.57
TRAF7-202ENST00000564067 ZCCHC6Q5VYS8 1495 aaKnown RBP37.32■■■■□ 3.56
TRAF7-202ENST00000564067 EIF4G1Q04637 1599 aaKnown RBP37.28■■■■□ 3.56
TRAF7-202ENST00000564067 SCRIBQ14160 1630 aa37.14■■■■□ 3.54
TRAF7-202ENST00000564067 DNAJC5Q9H3Z4 198 aa37.03■■■■□ 3.52
TRAF7-202ENST00000564067 CUX2O14529 1486 aa36.23■■■■□ 3.39
TRAF7-202ENST00000564067 ERCC6Q03468 1493 aa36.02■■■■□ 3.36
TRAF7-202ENST00000564067 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
TRAF7-202ENST00000564067 ATAD2BQ9ULI0 1458 aa35.66■■■■□ 3.3
TRAF7-202ENST00000564067 SMARCA2P51531 1590 aa35.57■■■■□ 3.28
TRAF7-202ENST00000564067 HMGXB3Q12766 1538 aa35.56■■■■□ 3.28
TRAF7-202ENST00000564067 NESP48681 1621 aa35.46■■■■□ 3.27
TRAF7-202ENST00000564067 SMARCA4P51532 1647 aa35.4■■■■□ 3.26
TRAF7-202ENST00000564067 BAZ1BQ9UIG0 1483 aaKnown RBP35.29■■■■□ 3.24
TRAF7-202ENST00000564067 THOC2Q8NI27 1593 aaKnown RBP35.25■■■■□ 3.23
TRAF7-202ENST00000564067 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
TRAF7-202ENST00000564067 BAZ1AQ9NRL2 1556 aaPredicted RBP35.19■■■■□ 3.22
TRAF7-202ENST00000564067 PEG3Q9GZU2 1588 aa35.12■■■■□ 3.21
TRAF7-202ENST00000564067 PDS5BQ9NTI5 1447 aa35.09■■■■□ 3.21
TRAF7-202ENST00000564067 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
TRAF7-202ENST00000564067 KIF21AQ7Z4S6 1674 aa34.95■■■■□ 3.19
TRAF7-202ENST00000564067 CADPSQ9ULU8 1353 aa34.8■■■■□ 3.16
TRAF7-202ENST00000564067 MROH2BQ7Z745 1585 aa34.79■■■■□ 3.16
TRAF7-202ENST00000564067 MRC2Q9UBG0 1479 aa34.76■■■■□ 3.15
TRAF7-202ENST00000564067 WDR62O43379 1518 aa34.67■■■■□ 3.14
TRAF7-202ENST00000564067 OSCARQ8IYS5 282 aa34.5■■■■□ 3.11
TRAF7-202ENST00000564067 CEP164Q9UPV0 1460 aa34.48■■■■□ 3.11
TRAF7-202ENST00000564067 FANCD2Q9BXW9 1451 aa34.36■■■■□ 3.09
TRAF7-202ENST00000564067 WIZO95785 1651 aa34.29■■■■□ 3.08
TRAF7-202ENST00000564067 CFTRP13569 1480 aa34.23■■■■□ 3.07
TRAF7-202ENST00000564067 URB2Q14146 1524 aaKnown RBP34.08■■■■□ 3.05
TRAF7-202ENST00000564067 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
TRAF7-202ENST00000564067 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
TRAF7-202ENST00000564067 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
TRAF7-202ENST00000564067 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
TRAF7-202ENST00000564067 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
TRAF7-202ENST00000564067 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
TRAF7-202ENST00000564067 ARHGEF11O15085 1522 aa33.83■■■■□ 3.01
TRAF7-202ENST00000564067 ZNF608Q9ULD9 1512 aaPredicted RBP33.76■■■■□ 3
TRAF7-202ENST00000564067 PRDM2Q13029 1718 aa33.72■■■□□ 2.99
TRAF7-202ENST00000564067 CYB5RLQ6IPT4 315 aa33.67■■■□□ 2.98
TRAF7-202ENST00000564067 ABCC8Q09428 1581 aa33.61■■■□□ 2.97
TRAF7-202ENST00000564067 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
TRAF7-202ENST00000564067 TRHP20396 242 aaPredicted RBP33.56■■■□□ 2.96
TRAF7-202ENST00000564067 EIF4G3O43432 1585 aaKnown RBP33.54■■■□□ 2.96
TRAF7-202ENST00000564067 CCDC88BA6NC98 1476 aa33.51■■■□□ 2.96
TRAF7-202ENST00000564067 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
TRAF7-202ENST00000564067 ARAP1Q96P48 1450 aa33.43■■■□□ 2.94
TRAF7-202ENST00000564067 AQRO60306 1485 aaKnown RBP eCLIP33.4■■■□□ 2.943e-6■■■■□ 19.7
TRAF7-202ENST00000564067 CHD1O14646 1710 aa33.39■■■□□ 2.94
TRAF7-202ENST00000564067 FBLN2P98095 1184 aa33.38■■■□□ 2.93
TRAF7-202ENST00000564067 TARBP1Q13395 1621 aaKnown RBP33.34■■■□□ 2.93
TRAF7-202ENST00000564067 POLA1P09884 1462 aaPredicted RBP33.23■■■□□ 2.91
TRAF7-202ENST00000564067 AEBP2Q6ZN18 517 aaPredicted RBP33.16■■■□□ 2.9
TRAF7-202ENST00000564067 SOGA1O94964 1423 aa33.11■■■□□ 2.89
TRAF7-202ENST00000564067 TDRD9Q8NDG6 1382 aaKnown RBP33.09■■■□□ 2.89
TRAF7-202ENST00000564067 CHMP7Q8WUX9 453 aaPredicted RBP33.08■■■□□ 2.89
TRAF7-202ENST00000564067 RAD54L2Q9Y4B4 1467 aa33.07■■■□□ 2.88
TRAF7-202ENST00000564067 WDR97A6NE52 1622 aa33.06■■■□□ 2.88
TRAF7-202ENST00000564067 CLASP1Q7Z460 1538 aa33.05■■■□□ 2.88
TRAF7-202ENST00000564067 SNAPC4Q5SXM2 1469 aa33.04■■■□□ 2.88
TRAF7-202ENST00000564067 SYNJ1O43426 1573 aa33.03■■■□□ 2.88
TRAF7-202ENST00000564067 MAGI1Q96QZ7 1491 aaPredicted RBP32.99■■■□□ 2.87
TRAF7-202ENST00000564067 GRIN2BQ13224 1484 aa32.92■■■□□ 2.86
TRAF7-202ENST00000564067 FGD5Q6ZNL6 1462 aa32.9■■■□□ 2.86
TRAF7-202ENST00000564067 SYNJ2O15056 1496 aa32.88■■■□□ 2.85
TRAF7-202ENST00000564067 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
TRAF7-202ENST00000564067 CUX1P39880 1505 aa32.72■■■□□ 2.83
TRAF7-202ENST00000564067 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
TRAF7-202ENST00000564067 ABCA10Q8WWZ4 1543 aa32.53■■■□□ 2.8
TRAF7-202ENST00000564067 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
TRAF7-202ENST00000564067 GRIN2AQ12879 1464 aa32.45■■■□□ 2.79
TRAF7-202ENST00000564067 ERCC6L2Q5T890 1561 aa32.41■■■□□ 2.78
TRAF7-202ENST00000564067 NUP160Q12769 1436 aa32.38■■■□□ 2.77
TRAF7-202ENST00000564067 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
TRAF7-202ENST00000564067 WRNQ14191 1432 aaPredicted RBP eCLIP32.31■■■□□ 2.76
TRAF7-202ENST00000564067 ADAMTS12P58397 1594 aa32.29■■■□□ 2.76
TRAF7-202ENST00000564067 SHROOM2Q13796 1616 aa32.27■■■□□ 2.76
TRAF7-202ENST00000564067 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.76
TRAF7-202ENST00000564067 KIF13AQ9H1H9 1805 aa32.19■■■□□ 2.74
TRAF7-202ENST00000564067 PRG4Q92954 1404 aaPredicted RBP32.13■■■□□ 2.73
TRAF7-202ENST00000564067 ERICH3Q5RHP9 1530 aa32.12■■■□□ 2.73
TRAF7-202ENST00000564067 NPM1P06748 294 aaKnown RBP eCLIP32.1■■■□□ 2.73
TRAF7-202ENST00000564067 JPH4Q96JJ6 628 aa32.1■■■□□ 2.73
TRAF7-202ENST00000564067 FAM69CQ0P6D2 419 aa32.08■■■□□ 2.73
TRAF7-202ENST00000564067 ABCC10Q5T3U5 1492 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms