RNA–Protein interactions for RNA: ENST00000424608.1

NUCB1-204, Transcript of nucleobindin 1, humanhuman

APPRIS ALT2 TSL 5

Gene NUCB1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-204ENST00000424608 NISCHQ9Y2I1 1504 aa48.87■■■■■ 5.41
NUCB1-204ENST00000424608 CCDC180Q9P1Z9 1646 aa43.55■■■■■ 4.56
NUCB1-204ENST00000424608 ABCC9O60706 1549 aa42.45■■■■■ 4.39
NUCB1-204ENST00000424608 RB1CC1Q8TDY2 1594 aa40.92■■■■■ 4.14
NUCB1-204ENST00000424608 NACADO15069 1562 aa40.87■■■■■ 4.13
NUCB1-204ENST00000424608 ZCCHC6Q5VYS8 1495 aaKnown RBP40.72■■■■■ 4.11
NUCB1-204ENST00000424608 DCAF8L2P0C7V8 631 aa40.68■■■■■ 4.1
NUCB1-204ENST00000424608 MYO15BQ96JP2 1530 aa40.63■■■■■ 4.1
NUCB1-204ENST00000424608 DCAF1Q9Y4B6 1507 aa40.47■■■■■ 4.07
NUCB1-204ENST00000424608 UNC13AQ9UPW8 1703 aa40.12■■■■■ 4.01
NUCB1-204ENST00000424608 BICRAQ9NZM4 1560 aa39.68■■■■□ 3.94
NUCB1-204ENST00000424608 SCRIBQ14160 1630 aa39.65■■■■□ 3.94
NUCB1-204ENST00000424608 PABPN1Q86U42 306 aaKnown RBP eCLIP39.6■■■■□ 3.93
NUCB1-204ENST00000424608 SHROOM4Q9ULL8 1493 aa39.27■■■■□ 3.88
NUCB1-204ENST00000424608 DNAJC5BQ9UF47 199 aa38.89■■■■□ 3.82
NUCB1-204ENST00000424608 EIF4G1Q04637 1599 aaKnown RBP38.62■■■■□ 3.77
NUCB1-204ENST00000424608 CC2D2AQ9P2K1 1620 aa38.47■■■■□ 3.75
NUCB1-204ENST00000424608 CECR2Q9BXF3 1484 aa38.15■■■■□ 3.7
NUCB1-204ENST00000424608 SMARCA4P51532 1647 aa37.96■■■■□ 3.67
NUCB1-204ENST00000424608 BAZ1AQ9NRL2 1556 aaPredicted RBP37.89■■■■□ 3.66
NUCB1-204ENST00000424608 SMARCA2P51531 1590 aa37.69■■■■□ 3.62
NUCB1-204ENST00000424608 ATAD2BQ9ULI0 1458 aa37.69■■■■□ 3.62
NUCB1-204ENST00000424608 NCAPD3P42695 1498 aa37.66■■■■□ 3.62
NUCB1-204ENST00000424608 MROH2BQ7Z745 1585 aa37.64■■■■□ 3.62
NUCB1-204ENST00000424608 PEG3Q9GZU2 1588 aa37.6■■■■□ 3.61
NUCB1-204ENST00000424608 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
NUCB1-204ENST00000424608 BAZ1BQ9UIG0 1483 aaKnown RBP37.39■■■■□ 3.58
NUCB1-204ENST00000424608 WIZO95785 1651 aa37.3■■■■□ 3.56
NUCB1-204ENST00000424608 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
NUCB1-204ENST00000424608 TOP2AP11388 1531 aaKnown RBP36.89■■■■□ 3.5
NUCB1-204ENST00000424608 NESP48681 1621 aa36.74■■■■□ 3.47
NUCB1-204ENST00000424608 LAMC3Q9Y6N6 1575 aa36.73■■■■□ 3.47
NUCB1-204ENST00000424608 ERCC6Q03468 1493 aa36.59■■■■□ 3.45
NUCB1-204ENST00000424608 CADPSQ9ULU8 1353 aa36.53■■■■□ 3.44
NUCB1-204ENST00000424608 KIF21AQ7Z4S6 1674 aa36.43■■■■□ 3.42
NUCB1-204ENST00000424608 PDS5BQ9NTI5 1447 aa36.41■■■■□ 3.42
NUCB1-204ENST00000424608 CCDC88BA6NC98 1476 aa36.4■■■■□ 3.42
NUCB1-204ENST00000424608 CFTRP13569 1480 aa36.36■■■■□ 3.41
NUCB1-204ENST00000424608 PRDM2Q13029 1718 aa36.28■■■■□ 3.4
NUCB1-204ENST00000424608 THOC2Q8NI27 1593 aaKnown RBP36.27■■■■□ 3.4
NUCB1-204ENST00000424608 CUX2O14529 1486 aa36.24■■■■□ 3.39
NUCB1-204ENST00000424608 SUPT5HO00267 1087 aaKnown RBP36.19■■■■□ 3.38
NUCB1-204ENST00000424608 FANCD2Q9BXW9 1451 aa36.15■■■■□ 3.38
NUCB1-204ENST00000424608 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
NUCB1-204ENST00000424608 MRC2Q9UBG0 1479 aa36.06■■■■□ 3.36
NUCB1-204ENST00000424608 WDR62O43379 1518 aa35.98■■■■□ 3.35
NUCB1-204ENST00000424608 URB2Q14146 1524 aaKnown RBP35.79■■■■□ 3.32
NUCB1-204ENST00000424608 ABCC8Q09428 1581 aa35.6■■■■□ 3.29
NUCB1-204ENST00000424608 TOPBP1Q92547 1522 aa35.59■■■■□ 3.29
NUCB1-204ENST00000424608 DNMBPQ6XZF7 1577 aa35.58■■■■□ 3.29
NUCB1-204ENST00000424608 IFT140Q96RY7 1462 aa35.35■■■■□ 3.25
NUCB1-204ENST00000424608 CUX1P39880 1505 aa35.32■■■■□ 3.25
NUCB1-204ENST00000424608 POLA1P09884 1462 aaPredicted RBP35.28■■■■□ 3.24
NUCB1-204ENST00000424608 TARBP1Q13395 1621 aaKnown RBP35.24■■■■□ 3.23
NUCB1-204ENST00000424608 FGD5Q6ZNL6 1462 aa35.2■■■■□ 3.23
NUCB1-204ENST00000424608 ZNF608Q9ULD9 1512 aaPredicted RBP35.17■■■■□ 3.22
NUCB1-204ENST00000424608 EIF4G3O43432 1585 aaKnown RBP35.12■■■■□ 3.21
NUCB1-204ENST00000424608 BIVM-ERCC5R4GMW8 1640 aa35.1■■■■□ 3.21
NUCB1-204ENST00000424608 SOGA1O94964 1423 aa35.1■■■■□ 3.21
NUCB1-204ENST00000424608 RAD54L2Q9Y4B4 1467 aa35.09■■■■□ 3.21
NUCB1-204ENST00000424608 WRNQ14191 1432 aaPredicted RBP eCLIP35.08■■■■□ 3.21
NUCB1-204ENST00000424608 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
NUCB1-204ENST00000424608 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
NUCB1-204ENST00000424608 DNAJC5Q9H3Z4 198 aa35.04■■■■□ 3.2
NUCB1-204ENST00000424608 WDR97A6NE52 1622 aa35.02■■■■□ 3.2
NUCB1-204ENST00000424608 AQRO60306 1485 aaKnown RBP eCLIP34.96■■■■□ 3.192e-6■■■■□ 20.1
NUCB1-204ENST00000424608 TDRD9Q8NDG6 1382 aaKnown RBP34.87■■■■□ 3.17
NUCB1-204ENST00000424608 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
NUCB1-204ENST00000424608 ABCA5Q8WWZ7 1642 aa34.78■■■■□ 3.16
NUCB1-204ENST00000424608 PBRM1Q86U86 1689 aa34.77■■■■□ 3.16
NUCB1-204ENST00000424608 GAPVD1Q14C86 1478 aa34.72■■■■□ 3.15
NUCB1-204ENST00000424608 CHD1O14646 1710 aa34.72■■■■□ 3.15
NUCB1-204ENST00000424608 GRIN2BQ13224 1484 aa34.71■■■■□ 3.15
NUCB1-204ENST00000424608 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
NUCB1-204ENST00000424608 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
NUCB1-204ENST00000424608 MAGI1Q96QZ7 1491 aaPredicted RBP34.65■■■■□ 3.14
NUCB1-204ENST00000424608 SYNJ2O15056 1496 aa34.5■■■■□ 3.11
NUCB1-204ENST00000424608 FBLN2P98095 1184 aa34.48■■■■□ 3.11
NUCB1-204ENST00000424608 ERICH3Q5RHP9 1530 aa34.47■■■■□ 3.11
NUCB1-204ENST00000424608 ADAMTS12P58397 1594 aa34.44■■■■□ 3.1
NUCB1-204ENST00000424608 CHMP7Q8WUX9 453 aaPredicted RBP34.42■■■■□ 3.1
NUCB1-204ENST00000424608 KIF27Q86VH2 1401 aa34.35■■■■□ 3.09
NUCB1-204ENST00000424608 FHAD1B1AJZ9 1412 aa34.31■■■■□ 3.08
NUCB1-204ENST00000424608 GRIN2AQ12879 1464 aa34.28■■■■□ 3.08
NUCB1-204ENST00000424608 CLASP1Q7Z460 1538 aa34.28■■■■□ 3.08
NUCB1-204ENST00000424608 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
NUCB1-204ENST00000424608 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
NUCB1-204ENST00000424608 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
NUCB1-204ENST00000424608 CUL7Q14999 1698 aa34.21■■■■□ 3.07
NUCB1-204ENST00000424608 TRIM41Q8WV44 630 aa34.2■■■■□ 3.07
NUCB1-204ENST00000424608 ARHGEF11O15085 1522 aa34.18■■■■□ 3.06
NUCB1-204ENST00000424608 IGF1RP08069 1367 aa34.17■■■■□ 3.06
NUCB1-204ENST00000424608 CEP170Q5SW79 1584 aa34.14■■■■□ 3.06
NUCB1-204ENST00000424608 NUP160Q12769 1436 aa34.13■■■■□ 3.05
NUCB1-204ENST00000424608 RUSC2Q8N2Y8 1516 aa34.03■■■■□ 3.04
NUCB1-204ENST00000424608 CARMIL1Q5VZK9 1371 aa33.98■■■■□ 3.03
NUCB1-204ENST00000424608 SHROOM2Q13796 1616 aa33.94■■■■□ 3.02
NUCB1-204ENST00000424608 ARAP1Q96P48 1450 aa33.88■■■■□ 3.01
NUCB1-204ENST00000424608 RAPGEF2Q9Y4G8 1499 aa33.81■■■■□ 3
NUCB1-204ENST00000424608 KIAA0586Q9BVV6 1533 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms