Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC103834.1-201ENST00000520383 144 ntBASIC23.75■■□□□ 1.39
URB1O60287 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.75■■□□□ 1.39
URB1O60287 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
URB1O60287 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.75■■□□□ 1.39
URB1O60287 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
URB1O60287 AC026202.3-201ENST00000600805 1127 ntBASIC23.74■■□□□ 1.39
URB1O60287 PVT1_1.1-201ENST00000615125 194 ntBASIC23.74■■□□□ 1.39
URB1O60287 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
URB1O60287 SMPD5-203ENST00000639008 1464 ntBASIC23.74■■□□□ 1.39
URB1O60287 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
URB1O60287 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
URB1O60287 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
URB1O60287 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.73■■□□□ 1.39
URB1O60287 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
URB1O60287 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
URB1O60287 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
URB1O60287 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
URB1O60287 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.73■■□□□ 1.39
URB1O60287 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
URB1O60287 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
URB1O60287 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
URB1O60287 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.72■■□□□ 1.39
URB1O60287 AC025884.2-201ENST00000553429 711 ntBASIC23.72■■□□□ 1.39
URB1O60287 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
URB1O60287 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.72■■□□□ 1.39
URB1O60287 AC093536.1-201ENST00000569153 554 ntBASIC23.72■■□□□ 1.39
URB1O60287 MIR4508-201ENST00000584178 70 ntBASIC23.72■■□□□ 1.39
URB1O60287 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.72■■□□□ 1.39
URB1O60287 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
URB1O60287 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
URB1O60287 SPCS2P3-201ENST00000500401 656 ntBASIC23.71■■□□□ 1.39
URB1O60287 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.7■■□□□ 1.38
URB1O60287 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
URB1O60287 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
URB1O60287 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
URB1O60287 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
URB1O60287 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
URB1O60287 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
URB1O60287 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
URB1O60287 AC103724.3-201ENST00000564481 992 ntBASIC23.68■■□□□ 1.38
URB1O60287 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.68■■□□□ 1.38
URB1O60287 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.68■■□□□ 1.38
URB1O60287 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.67■■□□□ 1.38
URB1O60287 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
URB1O60287 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
URB1O60287 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
URB1O60287 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
URB1O60287 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.67■■□□□ 1.38
URB1O60287 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
URB1O60287 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.66■■□□□ 1.38
URB1O60287 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.66■■□□□ 1.38
URB1O60287 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
URB1O60287 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
URB1O60287 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.66■■□□□ 1.38
URB1O60287 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
URB1O60287 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.64■■□□□ 1.38
URB1O60287 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
URB1O60287 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
URB1O60287 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.64■■□□□ 1.37
URB1O60287 MIR6765-201ENST00000614092 87 ntBASIC23.63■■□□□ 1.37
URB1O60287 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
URB1O60287 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
URB1O60287 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
URB1O60287 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
URB1O60287 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
URB1O60287 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.62■■□□□ 1.37
URB1O60287 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
URB1O60287 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
URB1O60287 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
URB1O60287 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.61■■□□□ 1.37
URB1O60287 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.61■■□□□ 1.37
URB1O60287 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
URB1O60287 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
URB1O60287 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.6■■□□□ 1.37
URB1O60287 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
URB1O60287 AC008406.3-201ENST00000620001 1374 ntBASIC23.6■■□□□ 1.37
URB1O60287 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
URB1O60287 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
URB1O60287 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
URB1O60287 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
URB1O60287 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
URB1O60287 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
URB1O60287 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
URB1O60287 AL359258.2-201ENST00000564063 1566 ntBASIC23.59■■□□□ 1.37
URB1O60287 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
URB1O60287 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
URB1O60287 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.58■■□□□ 1.37
URB1O60287 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
URB1O60287 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.57■■□□□ 1.36
URB1O60287 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.57■■□□□ 1.36
URB1O60287 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.57■■□□□ 1.36
URB1O60287 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
URB1O60287 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
URB1O60287 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.56■■□□□ 1.36
URB1O60287 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
URB1O60287 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
URB1O60287 AC239859.2-201ENST00000444165 318 ntBASIC23.56■■□□□ 1.36
URB1O60287 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
URB1O60287 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.56■■□□□ 1.36
URB1O60287 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms