Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-1A0A0K0K1D8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-1A0A0K0K1D8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV6-1A0A0K0K1D8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-1A0A0K0K1D8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-1A0A0K0K1D8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-1A0A0K0K1D8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-1A0A0K0K1D8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-1A0A0K0K1D8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRBV6-1A0A0K0K1D8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV6-1A0A0K0K1D8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-1A0A0K0K1D8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-1A0A0K0K1D8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-1A0A0K0K1D8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV6-1A0A0K0K1D8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 CAHM-201ENST00000604200 896 ntBASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV6-1A0A0K0K1D8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRBV6-1A0A0K0K1D8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV6-1A0A0K0K1D8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV6-1A0A0K0K1D8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.64■□□□□ 0.58
TRBV6-1A0A0K0K1D8 AC142472.1-201ENST00000612013 1741 ntBASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 LINC00273-201ENST00000539813 1452 ntBASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-1A0A0K0K1D8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-1A0A0K0K1D8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-1A0A0K0K1D8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-1A0A0K0K1D8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-1A0A0K0K1D8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-1A0A0K0K1D8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRBV6-1A0A0K0K1D8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-1A0A0K0K1D8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-1A0A0K0K1D8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV6-1A0A0K0K1D8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV6-1A0A0K0K1D8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-1A0A0K0K1D8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-1A0A0K0K1D8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-1A0A0K0K1D8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-1A0A0K0K1D8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-1A0A0K0K1D8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-1A0A0K0K1D8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.6■□□□□ 0.57
TRBV6-1A0A0K0K1D8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-1A0A0K0K1D8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRBV6-1A0A0K0K1D8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-1A0A0K0K1D8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV6-1A0A0K0K1D8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-1A0A0K0K1D8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV6-1A0A0K0K1D8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV6-1A0A0K0K1D8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-1A0A0K0K1D8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.58■□□□□ 0.56
TRBV6-1A0A0K0K1D8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRBV6-1A0A0K0K1D8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-1A0A0K0K1D8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-1A0A0K0K1D8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-1A0A0K0K1D8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 MIR762-201ENST00000390236 83 ntBASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-1A0A0K0K1D8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-1A0A0K0K1D8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-1A0A0K0K1D8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRBV6-1A0A0K0K1D8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRBV6-1A0A0K0K1D8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-1A0A0K0K1D8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-1A0A0K0K1D8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-1A0A0K0K1D8 ERN1-208ENST00000606895 2068 ntBASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 AC108673.1-201ENST00000510422 1159 ntBASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms