Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC42.16■■■■■ 4.343e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.98■■■■□ 3.833e-6■■□□□ 12.8
DROSHAQ9NRR4 EHMT2-208ENST00000465429 1454 ntTSL 238.59■■■■□ 3.773e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP1CC-211ENST00000620030 582 ntTSL 236.37■■■■□ 3.413e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC35.73■■■■□ 3.313e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-222ENST00000532260 574 ntTSL 435.64■■■■□ 3.31e-12■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-206ENST00000537157 479 ntTSL 235.45■■■■□ 3.273e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP1CC-209ENST00000551690 603 ntTSL 334.49■■■■□ 3.113e-6■■□□□ 12.8
DROSHAQ9NRR4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC34.46■■■■□ 3.113e-6■■□□□ 12.8
DROSHAQ9NRR4 RHOF-207ENST00000546227 1219 ntTSL 534.17■■■■□ 3.063e-6■■□□□ 12.8
DROSHAQ9NRR4 AGPAT2-203ENST00000470861 720 ntTSL 233.44■■■□□ 2.943e-6■■□□□ 12.8
DROSHAQ9NRR4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.933e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-217ENST00000530014 766 ntTSL 533.16■■■□□ 2.91e-12■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-227ENST00000534139 626 ntTSL 333.11■■■□□ 2.891e-12■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC33.09■■■□□ 2.893e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-206ENST00000547780 582 ntTSL 532.75■■■□□ 2.833e-6■■□□□ 12.8
DROSHAQ9NRR4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC32.36■■■□□ 2.773e-6■■□□□ 12.8
DROSHAQ9NRR4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC32.35■■■□□ 2.773e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC32.19■■■□□ 2.743e-6■■□□□ 12.8
DROSHAQ9NRR4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC32.12■■■□□ 2.733e-7■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-225ENST00000533075 582 ntTSL 330.58■■■□□ 2.491e-12■■□□□ 12.8
DROSHAQ9NRR4 BX322557.1-201ENST00000454115 389 ntTSL 1 (best)30.33■■■□□ 2.453e-7■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.443e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP2R5C-207ENST00000553730 1227 ntTSL 230.25■■■□□ 2.433e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-214ENST00000490474 2086 ntTSL 529.91■■■□□ 2.383e-6■■□□□ 12.8
DROSHAQ9NRR4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC29.83■■■□□ 2.374e-6■■□□□ 12.8
DROSHAQ9NRR4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC29.83■■■□□ 2.374e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC29.72■■■□□ 2.353e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-201ENST00000428029 1024 ntTSL 229.44■■■□□ 2.33e-6■■□□□ 12.8
DROSHAQ9NRR4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.26■■■□□ 2.273e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-205ENST00000525086 575 ntTSL 428.84■■■□□ 2.211e-12■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-218ENST00000530103 544 ntTSL 528.84■■■□□ 2.211e-12■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC28.66■■■□□ 2.183e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.123e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC28.16■■■□□ 2.13e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-221ENST00000532244 786 ntTSL 228.09■■■□□ 2.091e-12■■□□□ 12.8
DROSHAQ9NRR4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.084e-6■■□□□ 12.8
DROSHAQ9NRR4 FOXK2-206ENST00000531030 805 ntTSL 328■■■□□ 2.073e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC27.9■■■□□ 2.063e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-210ENST00000543167 1059 ntTSL 227.61■■■□□ 2.013e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-227ENST00000551043 2288 ntTSL 227.6■■■□□ 2.013e-6■■□□□ 12.8
DROSHAQ9NRR4 FLOT2-207ENST00000581509 426 ntTSL 226.94■■□□□ 1.93e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-236ENST00000552231 1545 ntTSL 226.82■■□□□ 1.883e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-209ENST00000461744 2098 ntTSL 526.71■■□□□ 1.873e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-212ENST00000477914 2063 ntTSL 526.71■■□□□ 1.873e-6■■□□□ 12.8
DROSHAQ9NRR4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC26.57■■□□□ 1.843e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-203ENST00000535614 480 ntTSL 426.41■■□□□ 1.823e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-210ENST00000467491 2131 ntTSL 526.32■■□□□ 1.83e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-211ENST00000475881 536 ntTSL 1 (best)26.2■■□□□ 1.783e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-219ENST00000530638 582 ntTSL 526■■□□□ 1.751e-12■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC25.81■■□□□ 1.723e-6■■□□□ 12.8
DROSHAQ9NRR4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC25.64■■□□□ 1.693e-6■■□□□ 12.8
DROSHAQ9NRR4 CAPN12-206ENST00000597354 519 ntTSL 325.56■■□□□ 1.683e-6■■□□□ 12.8
DROSHAQ9NRR4 RHOF-206ENST00000545544 826 ntTSL 525.51■■□□□ 1.673e-6■■□□□ 12.8
DROSHAQ9NRR4 RHOF-205ENST00000541657 1626 ntTSL 525.46■■□□□ 1.673e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-207ENST00000441697 244 ntTSL 1 (best)25.45■■□□□ 1.673e-6■■□□□ 12.8
DROSHAQ9NRR4 CAPN12-203ENST00000594497 526 ntTSL 325.31■■□□□ 1.643e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.93■■□□□ 1.583e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-204ENST00000524876 584 ntTSL 424.7■■□□□ 1.551e-12■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-206ENST00000446247 663 ntTSL 524.61■■□□□ 1.533e-6■■□□□ 12.8
DROSHAQ9NRR4 CAPN12-205ENST00000595177 488 ntTSL 424.53■■□□□ 1.523e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-208ENST00000450232 595 ntTSL 324.18■■□□□ 1.463e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC23.73■■□□□ 1.393e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-203ENST00000524838 1200 ntTSL 1 (best)23.55■■□□□ 1.361e-12■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-210ENST00000475094 606 ntTSL 223.52■■□□□ 1.363e-6■■□□□ 12.8
DROSHAQ9NRR4 CAPN12-211ENST00000601685 2552 nt23.35■■□□□ 1.333e-6■■□□□ 12.8
DROSHAQ9NRR4 PHF19-213ENST00000487555 1092 ntTSL 1 (best)23.34■■□□□ 1.333e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-209ENST00000548159 2549 ntTSL 1 (best)23.13■■□□□ 1.293e-6■■□□□ 12.8
DROSHAQ9NRR4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC22.93■■□□□ 1.263e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-208ENST00000541694 875 ntTSL 222.88■■□□□ 1.253e-6■■□□□ 12.8
DROSHAQ9NRR4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.234e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC22.59■■□□□ 1.213e-6■■□□□ 12.8
DROSHAQ9NRR4 CAPN12-202ENST00000593700 1118 ntTSL 1 (best)22.25■■□□□ 1.153e-6■■□□□ 12.8
DROSHAQ9NRR4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC22.18■■□□□ 1.143e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC22.15■■□□□ 1.143e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-224ENST00000532343 620 ntTSL 321.87■■□□□ 1.091e-12■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-215ENST00000529867 582 ntTSL 321.87■■□□□ 1.091e-12■■□□□ 12.8
DROSHAQ9NRR4 SDHD-209ENST00000640554 727 ntTSL 521.86■■□□□ 1.093e-6■■□□□ 12.8
DROSHAQ9NRR4 FOXK2-203ENST00000526383 786 ntTSL 521.7■■□□□ 1.063e-6■■□□□ 12.8
DROSHAQ9NRR4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC21.62■■□□□ 1.053e-6■■□□□ 12.8
DROSHAQ9NRR4 CNOT2-220ENST00000549750 1085 ntTSL 521.51■■□□□ 1.033e-6■■□□□ 12.8
DROSHAQ9NRR4 DNAH14-218ENST00000498360 951 ntTSL 321.32■■□□□ 13e-6■■□□□ 12.8
DROSHAQ9NRR4 GABPB1-212ENST00000615671 6266 nt21.11■□□□□ 0.973e-6■■□□□ 12.8
DROSHAQ9NRR4 DOT1L-205ENST00000478937 638 ntTSL 321.03■□□□□ 0.963e-6■■□□□ 12.8
DROSHAQ9NRR4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.913e-6■■□□□ 12.8
DROSHAQ9NRR4 CCNT2-203ENST00000417175 811 ntTSL 320.72■□□□□ 0.913e-6■■□□□ 12.8
DROSHAQ9NRR4 MRPL37-203ENST00000398219 868 ntTSL 320.51■□□□□ 0.873e-6■■□□□ 12.8
DROSHAQ9NRR4 NDUFV1-212ENST00000528328 477 ntTSL 420.51■□□□□ 0.871e-12■■□□□ 12.8
DROSHAQ9NRR4 CAPN12-204ENST00000594552 1046 ntTSL 220.12■□□□□ 0.813e-6■■□□□ 12.8
DROSHAQ9NRR4 CAPN12-209ENST00000597987 896 ntTSL 519.91■□□□□ 0.783e-6■■□□□ 12.8
DROSHAQ9NRR4 PFKFB3-206ENST00000414237 513 ntTSL 1 (best)19.78■□□□□ 0.763e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-213ENST00000532699 571 ntTSL 319.7■□□□□ 0.743e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-212ENST00000531744 566 ntTSL 219.7■□□□□ 0.743e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-211ENST00000525987 968 ntTSL 419.7■□□□□ 0.743e-6■■□□□ 12.8
DROSHAQ9NRR4 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.733e-6■■□□□ 12.8
DROSHAQ9NRR4 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.733e-6■■□□□ 12.8
DROSHAQ9NRR4 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.723e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC19.45■□□□□ 0.73e-6■■□□□ 12.8
DROSHAQ9NRR4 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.73e-6■■□□□ 12.8
DROSHAQ9NRR4 EHMT1-201ENST00000371394 2679 ntTSL 219.42■□□□□ 0.73e-6■■□□□ 12.8
Retrieved 100 of 16,331 protein–RNA pairs in 92.7 ms