RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
CAPN12-206ENST00000597354 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.32
CAPN12-206ENST00000597354 ABCC9O60706 1549 aa35.03■■■■□ 3.2
CAPN12-206ENST00000597354 DCAF8L2P0C7V8 631 aa33.88■■■■□ 3.01
CAPN12-206ENST00000597354 RB1CC1Q8TDY2 1594 aa33.64■■■□□ 2.98
CAPN12-206ENST00000597354 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
CAPN12-206ENST00000597354 NACADO15069 1562 aa33.61■■■□□ 2.97
CAPN12-206ENST00000597354 MYO15BQ96JP2 1530 aa33.37■■■□□ 2.93
CAPN12-206ENST00000597354 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
CAPN12-206ENST00000597354 UNC13AQ9UPW8 1703 aa32.94■■■□□ 2.86
CAPN12-206ENST00000597354 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.842e-9■■□□□ 13.2
CAPN12-206ENST00000597354 SCRIBQ14160 1630 aa32.79■■■□□ 2.84
CAPN12-206ENST00000597354 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
CAPN12-206ENST00000597354 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
CAPN12-206ENST00000597354 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
CAPN12-206ENST00000597354 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
CAPN12-206ENST00000597354 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.65
CAPN12-206ENST00000597354 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
CAPN12-206ENST00000597354 SMARCA4P51532 1647 aa31.31■■■□□ 2.6
CAPN12-206ENST00000597354 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.59
CAPN12-206ENST00000597354 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
CAPN12-206ENST00000597354 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
CAPN12-206ENST00000597354 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
CAPN12-206ENST00000597354 NCAPD3P42695 1498 aa31.02■■■□□ 2.56
CAPN12-206ENST00000597354 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
CAPN12-206ENST00000597354 BAZ1BQ9UIG0 1483 aaKnown RBP30.87■■■□□ 2.53
CAPN12-206ENST00000597354 WIZO95785 1651 aa30.87■■■□□ 2.53
CAPN12-206ENST00000597354 HMGXB3Q12766 1538 aa30.86■■■□□ 2.53
CAPN12-206ENST00000597354 RSF1Q96T23 1441 aaPredicted RBP30.84■■■□□ 2.53
CAPN12-206ENST00000597354 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
CAPN12-206ENST00000597354 NESP48681 1621 aa30.36■■■□□ 2.45
CAPN12-206ENST00000597354 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
CAPN12-206ENST00000597354 LAMC3Q9Y6N6 1575 aa30.18■■■□□ 2.42
CAPN12-206ENST00000597354 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
CAPN12-206ENST00000597354 CCDC88BA6NC98 1476 aa30.16■■■□□ 2.42
CAPN12-206ENST00000597354 ERCC6Q03468 1493 aa30.15■■■□□ 2.42
CAPN12-206ENST00000597354 CFTRP13569 1480 aa29.99■■■□□ 2.39
CAPN12-206ENST00000597354 PDS5BQ9NTI5 1447 aa29.99■■■□□ 2.39
CAPN12-206ENST00000597354 KIF21AQ7Z4S6 1674 aa29.97■■■□□ 2.39
CAPN12-206ENST00000597354 FANCD2Q9BXW9 1451 aa29.84■■■□□ 2.37
CAPN12-206ENST00000597354 THOC2Q8NI27 1593 aaKnown RBP29.78■■■□□ 2.36
CAPN12-206ENST00000597354 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
CAPN12-206ENST00000597354 PRDM2Q13029 1718 aa29.76■■■□□ 2.36
CAPN12-206ENST00000597354 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.35
CAPN12-206ENST00000597354 CUX2O14529 1486 aa29.69■■■□□ 2.34
CAPN12-206ENST00000597354 WDR62O43379 1518 aa29.57■■■□□ 2.32
CAPN12-206ENST00000597354 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
CAPN12-206ENST00000597354 TOPBP1Q92547 1522 aa29.37■■■□□ 2.29
CAPN12-206ENST00000597354 DNMBPQ6XZF7 1577 aa29.33■■■□□ 2.29
CAPN12-206ENST00000597354 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
CAPN12-206ENST00000597354 CUX1P39880 1505 aa29.22■■■□□ 2.27
CAPN12-206ENST00000597354 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
CAPN12-206ENST00000597354 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
CAPN12-206ENST00000597354 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
CAPN12-206ENST00000597354 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
CAPN12-206ENST00000597354 RAD54L2Q9Y4B4 1467 aa29.07■■■□□ 2.24
CAPN12-206ENST00000597354 ZNF608Q9ULD9 1512 aaPredicted RBP29.06■■■□□ 2.24
CAPN12-206ENST00000597354 SOGA1O94964 1423 aa29.04■■■□□ 2.24
CAPN12-206ENST00000597354 TARBP1Q13395 1621 aaKnown RBP29.03■■■□□ 2.24
CAPN12-206ENST00000597354 SYNJ1O43426 1573 aa29.02■■■□□ 2.24
CAPN12-206ENST00000597354 TOP2BQ02880 1626 aa28.97■■■□□ 2.23
CAPN12-206ENST00000597354 BIVM-ERCC5R4GMW8 1640 aa28.96■■■□□ 2.23
CAPN12-206ENST00000597354 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.222e-12■■■■□ 26.1
CAPN12-206ENST00000597354 EIF4G3O43432 1585 aaKnown RBP28.91■■■□□ 2.22
CAPN12-206ENST00000597354 TDRD9Q8NDG6 1382 aaKnown RBP28.9■■■□□ 2.22
CAPN12-206ENST00000597354 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
CAPN12-206ENST00000597354 ABCA10Q8WWZ4 1543 aa28.77■■■□□ 2.2
CAPN12-206ENST00000597354 DNAJC5Q9H3Z4 198 aa28.69■■■□□ 2.18
CAPN12-206ENST00000597354 GAPVD1Q14C86 1478 aa28.69■■■□□ 2.18
CAPN12-206ENST00000597354 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
CAPN12-206ENST00000597354 GRIN2BQ13224 1484 aa28.65■■■□□ 2.18
CAPN12-206ENST00000597354 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
CAPN12-206ENST00000597354 PBRM1Q86U86 1689 aa28.63■■■□□ 2.17
CAPN12-206ENST00000597354 FBLN2P98095 1184 aa28.61■■■□□ 2.17
CAPN12-206ENST00000597354 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
CAPN12-206ENST00000597354 TRIM41Q8WV44 630 aa28.55■■■□□ 2.16
CAPN12-206ENST00000597354 CHD1O14646 1710 aa28.55■■■□□ 2.16
CAPN12-206ENST00000597354 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
CAPN12-206ENST00000597354 CHMP7Q8WUX9 453 aaPredicted RBP28.49■■■□□ 2.15
CAPN12-206ENST00000597354 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
CAPN12-206ENST00000597354 SYNJ2O15056 1496 aa28.44■■■□□ 2.14
CAPN12-206ENST00000597354 ERICH3Q5RHP9 1530 aa28.42■■■□□ 2.14
CAPN12-206ENST00000597354 ADAMTS12P58397 1594 aa28.38■■■□□ 2.13
CAPN12-206ENST00000597354 FHAD1B1AJZ9 1412 aa28.34■■■□□ 2.13
CAPN12-206ENST00000597354 IGF1RP08069 1367 aa28.33■■■□□ 2.13
CAPN12-206ENST00000597354 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
CAPN12-206ENST00000597354 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
CAPN12-206ENST00000597354 GRIN2AQ12879 1464 aa28.29■■■□□ 2.12
CAPN12-206ENST00000597354 CUL7Q14999 1698 aa28.19■■■□□ 2.1
CAPN12-206ENST00000597354 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
CAPN12-206ENST00000597354 CEP170Q5SW79 1584 aa28.17■■■□□ 2.1
CAPN12-206ENST00000597354 CARMIL1Q5VZK9 1371 aa28.17■■■□□ 2.1
CAPN12-206ENST00000597354 NUP160Q12769 1436 aa28.13■■■□□ 2.09
CAPN12-206ENST00000597354 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
CAPN12-206ENST00000597354 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
CAPN12-206ENST00000597354 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
CAPN12-206ENST00000597354 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
CAPN12-206ENST00000597354 FAM9AQ8IZU1 332 aaPredicted RBP28.07■■■□□ 2.08
CAPN12-206ENST00000597354 RAPGEF2Q9Y4G8 1499 aa28■■■□□ 2.07
CAPN12-206ENST00000597354 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms