RNA–Protein interactions for RNA: ENST00000534139.5

NDUFV1-227, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 3

Gene NDUFV1, Length 626 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-227ENST00000534139 NISCHQ9Y2I1 1504 aa52.35■■■■■ 5.97
NDUFV1-227ENST00000534139 CCDC180Q9P1Z9 1646 aa46.45■■■■■ 5.03
NDUFV1-227ENST00000534139 ABCC9O60706 1549 aa45.54■■■■■ 4.88
NDUFV1-227ENST00000534139 DCAF8L2P0C7V8 631 aa43.92■■■■■ 4.62
NDUFV1-227ENST00000534139 RB1CC1Q8TDY2 1594 aa43.79■■■■■ 4.6
NDUFV1-227ENST00000534139 NACADO15069 1562 aa43.75■■■■■ 4.59
NDUFV1-227ENST00000534139 ZCCHC6Q5VYS8 1495 aaKnown RBP43.58■■■■■ 4.57
NDUFV1-227ENST00000534139 MYO15BQ96JP2 1530 aa43.48■■■■■ 4.55
NDUFV1-227ENST00000534139 DCAF1Q9Y4B6 1507 aa43.3■■■■■ 4.52
NDUFV1-227ENST00000534139 UNC13AQ9UPW8 1703 aa42.66■■■■■ 4.42
NDUFV1-227ENST00000534139 PABPN1Q86U42 306 aaKnown RBP eCLIP42.63■■■■■ 4.41
NDUFV1-227ENST00000534139 SCRIBQ14160 1630 aa42.43■■■■■ 4.38
NDUFV1-227ENST00000534139 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
NDUFV1-227ENST00000534139 SHROOM4Q9ULL8 1493 aa42■■■■■ 4.31
NDUFV1-227ENST00000534139 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
NDUFV1-227ENST00000534139 EIF4G1Q04637 1599 aaKnown RBP41.32■■■■■ 4.2
NDUFV1-227ENST00000534139 CC2D2AQ9P2K1 1620 aa41.15■■■■■ 4.18
NDUFV1-227ENST00000534139 CECR2Q9BXF3 1484 aa40.92■■■■■ 4.14
NDUFV1-227ENST00000534139 BAZ1AQ9NRL2 1556 aaPredicted RBP40.58■■■■■ 4.09
NDUFV1-227ENST00000534139 SMARCA4P51532 1647 aa40.57■■■■■ 4.09
NDUFV1-227ENST00000534139 ATAD2BQ9ULI0 1458 aa40.41■■■■■ 4.06
NDUFV1-227ENST00000534139 NCAPD3P42695 1498 aa40.39■■■■■ 4.06
NDUFV1-227ENST00000534139 SMARCA2P51531 1590 aa40.35■■■■■ 4.05
NDUFV1-227ENST00000534139 MROH2BQ7Z745 1585 aa40.33■■■■■ 4.05
NDUFV1-227ENST00000534139 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
NDUFV1-227ENST00000534139 HMGXB3Q12766 1538 aa40.14■■■■■ 4.02
NDUFV1-227ENST00000534139 BAZ1BQ9UIG0 1483 aaKnown RBP40.09■■■■■ 4.01
NDUFV1-227ENST00000534139 RSF1Q96T23 1441 aaPredicted RBP39.91■■■■□ 3.98
NDUFV1-227ENST00000534139 WIZO95785 1651 aa39.87■■■■□ 3.97
NDUFV1-227ENST00000534139 TOP2AP11388 1531 aaKnown RBP39.47■■■■□ 3.91
NDUFV1-227ENST00000534139 NESP48681 1621 aa39.38■■■■□ 3.89
NDUFV1-227ENST00000534139 ERCC6Q03468 1493 aa39.29■■■■□ 3.88
NDUFV1-227ENST00000534139 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
NDUFV1-227ENST00000534139 CADPSQ9ULU8 1353 aa39.25■■■■□ 3.87
NDUFV1-227ENST00000534139 PDS5BQ9NTI5 1447 aa39.11■■■■□ 3.85
NDUFV1-227ENST00000534139 CCDC88BA6NC98 1476 aa39.05■■■■□ 3.84
NDUFV1-227ENST00000534139 SUPT5HO00267 1087 aaKnown RBP39.04■■■■□ 3.84
NDUFV1-227ENST00000534139 CFTRP13569 1480 aa38.98■■■■□ 3.83
NDUFV1-227ENST00000534139 KIF21AQ7Z4S6 1674 aa38.84■■■■□ 3.81
NDUFV1-227ENST00000534139 CUX2O14529 1486 aa38.82■■■■□ 3.81
NDUFV1-227ENST00000534139 FANCD2Q9BXW9 1451 aa38.77■■■■□ 3.8
NDUFV1-227ENST00000534139 CEP164Q9UPV0 1460 aa38.72■■■■□ 3.79
NDUFV1-227ENST00000534139 THOC2Q8NI27 1593 aaKnown RBP38.71■■■■□ 3.79
NDUFV1-227ENST00000534139 MRC2Q9UBG0 1479 aa38.65■■■■□ 3.78
NDUFV1-227ENST00000534139 PRDM2Q13029 1718 aa38.55■■■■□ 3.76
NDUFV1-227ENST00000534139 WDR62O43379 1518 aa38.48■■■■□ 3.75
NDUFV1-227ENST00000534139 URB2Q14146 1524 aaKnown RBP38.33■■■■□ 3.73
NDUFV1-227ENST00000534139 ABCC8Q09428 1581 aa38.19■■■■□ 3.7
NDUFV1-227ENST00000534139 TOPBP1Q92547 1522 aa38.13■■■■□ 3.69
NDUFV1-227ENST00000534139 DNMBPQ6XZF7 1577 aa38.07■■■■□ 3.69
NDUFV1-227ENST00000534139 IFT140Q96RY7 1462 aa37.91■■■■□ 3.66
NDUFV1-227ENST00000534139 CUX1P39880 1505 aa37.82■■■■□ 3.65
NDUFV1-227ENST00000534139 POLA1P09884 1462 aaPredicted RBP37.8■■■■□ 3.64
NDUFV1-227ENST00000534139 FGD5Q6ZNL6 1462 aa37.72■■■■□ 3.63
NDUFV1-227ENST00000534139 SOGA1O94964 1423 aa37.72■■■■□ 3.63
NDUFV1-227ENST00000534139 ZNF608Q9ULD9 1512 aaPredicted RBP37.71■■■■□ 3.63
NDUFV1-227ENST00000534139 DNAJC5Q9H3Z4 198 aa37.68■■■■□ 3.62
NDUFV1-227ENST00000534139 RAD54L2Q9Y4B4 1467 aa37.66■■■■□ 3.62
NDUFV1-227ENST00000534139 TARBP1Q13395 1621 aaKnown RBP37.66■■■■□ 3.62
NDUFV1-227ENST00000534139 WRNQ14191 1432 aaPredicted RBP eCLIP37.66■■■■□ 3.62
NDUFV1-227ENST00000534139 AQRO60306 1485 aaKnown RBP eCLIP37.54■■■■□ 3.65e-7■■■□□ 16.8
NDUFV1-227ENST00000534139 EIF4G3O43432 1585 aaKnown RBP37.51■■■■□ 3.6
NDUFV1-227ENST00000534139 TDRD9Q8NDG6 1382 aaKnown RBP37.51■■■■□ 3.59
NDUFV1-227ENST00000534139 TOP2BQ02880 1626 aa37.5■■■■□ 3.59
NDUFV1-227ENST00000534139 SYNJ1O43426 1573 aa37.48■■■■□ 3.59
NDUFV1-227ENST00000534139 BIVM-ERCC5R4GMW8 1640 aa37.47■■■■□ 3.59
NDUFV1-227ENST00000534139 WDR97A6NE52 1622 aa37.39■■■■□ 3.58
NDUFV1-227ENST00000534139 ABCA10Q8WWZ4 1543 aa37.36■■■■□ 3.57
NDUFV1-227ENST00000534139 OSCARQ8IYS5 282 aa37.33■■■■□ 3.57
NDUFV1-227ENST00000534139 GAPVD1Q14C86 1478 aa37.26■■■■□ 3.55
NDUFV1-227ENST00000534139 GRIN2BQ13224 1484 aa37.25■■■■□ 3.55
NDUFV1-227ENST00000534139 FBLN2P98095 1184 aa37.19■■■■□ 3.54
NDUFV1-227ENST00000534139 SNAPC4Q5SXM2 1469 aa37.16■■■■□ 3.54
NDUFV1-227ENST00000534139 ABCA5Q8WWZ7 1642 aa37.14■■■■□ 3.54
NDUFV1-227ENST00000534139 MAGI1Q96QZ7 1491 aaPredicted RBP37.13■■■■□ 3.53
NDUFV1-227ENST00000534139 CHMP7Q8WUX9 453 aaPredicted RBP37.08■■■■□ 3.53
NDUFV1-227ENST00000534139 PBRM1Q86U86 1689 aa37.06■■■■□ 3.52
NDUFV1-227ENST00000534139 CHD1O14646 1710 aa37.01■■■■□ 3.51
NDUFV1-227ENST00000534139 SYNJ2O15056 1496 aa36.99■■■■□ 3.51
NDUFV1-227ENST00000534139 ERICH3Q5RHP9 1530 aa36.91■■■■□ 3.5
NDUFV1-227ENST00000534139 TRIM41Q8WV44 630 aa36.9■■■■□ 3.5
NDUFV1-227ENST00000534139 KIF27Q86VH2 1401 aa36.9■■■■□ 3.5
NDUFV1-227ENST00000534139 FHAD1B1AJZ9 1412 aa36.84■■■■□ 3.49
NDUFV1-227ENST00000534139 ADAMTS12P58397 1594 aa36.8■■■■□ 3.48
NDUFV1-227ENST00000534139 GRIN2AQ12879 1464 aa36.75■■■■□ 3.47
NDUFV1-227ENST00000534139 IGF1RP08069 1367 aa36.74■■■■□ 3.47
NDUFV1-227ENST00000534139 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
NDUFV1-227ENST00000534139 ARHGEF11O15085 1522 aa36.59■■■■□ 3.45
NDUFV1-227ENST00000534139 NUP160Q12769 1436 aa36.58■■■■□ 3.45
NDUFV1-227ENST00000534139 RIMBP3CA6NJZ7 1639 aa36.56■■■■□ 3.44
NDUFV1-227ENST00000534139 RIMBP3BA6NNM3 1639 aa36.56■■■■□ 3.44
NDUFV1-227ENST00000534139 RIMBP3Q9UFD9 1639 aa36.56■■■■□ 3.44
NDUFV1-227ENST00000534139 CUL7Q14999 1698 aa36.54■■■■□ 3.44
NDUFV1-227ENST00000534139 CARMIL1Q5VZK9 1371 aa36.54■■■■□ 3.44
NDUFV1-227ENST00000534139 RUSC2Q8N2Y8 1516 aa36.51■■■■□ 3.44
NDUFV1-227ENST00000534139 CEP170Q5SW79 1584 aa36.51■■■■□ 3.44
NDUFV1-227ENST00000534139 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
NDUFV1-227ENST00000534139 CYB5RLQ6IPT4 315 aa36.38■■■■□ 3.41
NDUFV1-227ENST00000534139 JPH4Q96JJ6 628 aa36.31■■■■□ 3.4
NDUFV1-227ENST00000534139 ARAP1Q96P48 1450 aa36.3■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms