RNA–Protein interactions for RNA: ENST00000490474.5

PFKFB3-214, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 5

Gene PFKFB3, Length 2,086 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-214ENST00000490474 NISCHQ9Y2I1 1504 aa44.58■■■■■ 4.73
PFKFB3-214ENST00000490474 CCDC180Q9P1Z9 1646 aa38.77■■■■□ 3.8
PFKFB3-214ENST00000490474 ZCCHC6Q5VYS8 1495 aaKnown RBP37.53■■■■□ 3.6
PFKFB3-214ENST00000490474 DCAF1Q9Y4B6 1507 aa36.82■■■■□ 3.48
PFKFB3-214ENST00000490474 DCAF8L2P0C7V8 631 aa36.76■■■■□ 3.47
PFKFB3-214ENST00000490474 SHROOM4Q9ULL8 1493 aa36.69■■■■□ 3.46
PFKFB3-214ENST00000490474 ABCC9O60706 1549 aa36.34■■■■□ 3.41
PFKFB3-214ENST00000490474 MYO15BQ96JP2 1530 aa36.23■■■■□ 3.39
PFKFB3-214ENST00000490474 NACADO15069 1562 aa35.97■■■■□ 3.35
PFKFB3-214ENST00000490474 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
PFKFB3-214ENST00000490474 RB1CC1Q8TDY2 1594 aa35.62■■■■□ 3.29
PFKFB3-214ENST00000490474 SUPT5HO00267 1087 aaKnown RBP35.45■■■■□ 3.27
PFKFB3-214ENST00000490474 UNC13AQ9UPW8 1703 aa35.06■■■■□ 3.2
PFKFB3-214ENST00000490474 RSF1Q96T23 1441 aaPredicted RBP34.7■■■■□ 3.15
PFKFB3-214ENST00000490474 CECR2Q9BXF3 1484 aa34.63■■■■□ 3.13
PFKFB3-214ENST00000490474 BICRAQ9NZM4 1560 aa34.54■■■■□ 3.12
PFKFB3-214ENST00000490474 MROH2BQ7Z745 1585 aa34.48■■■■□ 3.11
PFKFB3-214ENST00000490474 BAZ1AQ9NRL2 1556 aaPredicted RBP34.42■■■■□ 3.1
PFKFB3-214ENST00000490474 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
PFKFB3-214ENST00000490474 WIZO95785 1651 aa34.3■■■■□ 3.08
PFKFB3-214ENST00000490474 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
PFKFB3-214ENST00000490474 CHIC1Q5VXU3 224 aa34.06■■■■□ 3.04
PFKFB3-214ENST00000490474 TOP2AP11388 1531 aaKnown RBP33.88■■■■□ 3.01
PFKFB3-214ENST00000490474 PEG3Q9GZU2 1588 aa33.76■■■■□ 3
PFKFB3-214ENST00000490474 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
PFKFB3-214ENST00000490474 ATAD2BQ9ULI0 1458 aa33.53■■■□□ 2.96
PFKFB3-214ENST00000490474 CCDC88BA6NC98 1476 aa33.52■■■□□ 2.96
PFKFB3-214ENST00000490474 EIF4G1Q04637 1599 aaKnown RBP33.48■■■□□ 2.95
PFKFB3-214ENST00000490474 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
PFKFB3-214ENST00000490474 TRIM41Q8WV44 630 aa33.27■■■□□ 2.92
PFKFB3-214ENST00000490474 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
PFKFB3-214ENST00000490474 NCAPD3P42695 1498 aa33.15■■■□□ 2.9
PFKFB3-214ENST00000490474 ABCC8Q09428 1581 aa33.01■■■□□ 2.87
PFKFB3-214ENST00000490474 CC2D2AQ9P2K1 1620 aa32.92■■■□□ 2.86
PFKFB3-214ENST00000490474 LOC105371045A0A1W2PR82 267 aa32.81■■■□□ 2.84
PFKFB3-214ENST00000490474 FAM9AQ8IZU1 332 aaPredicted RBP32.72■■■□□ 2.83
PFKFB3-214ENST00000490474 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
PFKFB3-214ENST00000490474 SYNJ1O43426 1573 aa32.59■■■□□ 2.81
PFKFB3-214ENST00000490474 PRDM2Q13029 1718 aa32.58■■■□□ 2.81
PFKFB3-214ENST00000490474 CFTRP13569 1480 aa32.54■■■□□ 2.8
PFKFB3-214ENST00000490474 TOP2BQ02880 1626 aa32.41■■■□□ 2.78
PFKFB3-214ENST00000490474 SOGA1O94964 1423 aa32.4■■■□□ 2.78
PFKFB3-214ENST00000490474 BIVM-ERCC5R4GMW8 1640 aa32.4■■■□□ 2.78
PFKFB3-214ENST00000490474 EEA1Q15075 1411 aa32.36■■■□□ 2.77
PFKFB3-214ENST00000490474 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
PFKFB3-214ENST00000490474 EHMT2Q96KQ7 1210 aa32.3■■■□□ 2.76
PFKFB3-214ENST00000490474 RUSC2Q8N2Y8 1516 aa32.27■■■□□ 2.76
PFKFB3-214ENST00000490474 CUX1P39880 1505 aa32.22■■■□□ 2.75
PFKFB3-214ENST00000490474 CSRNP3Q8WYN3 585 aa32.14■■■□□ 2.74
PFKFB3-214ENST00000490474 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
PFKFB3-214ENST00000490474 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
PFKFB3-214ENST00000490474 NESP48681 1621 aa32.02■■■□□ 2.72
PFKFB3-214ENST00000490474 KIF21BO75037 1637 aa32■■■□□ 2.71
PFKFB3-214ENST00000490474 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
PFKFB3-214ENST00000490474 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
PFKFB3-214ENST00000490474 DNAJC5BQ9UF47 199 aa31.91■■■□□ 2.7
PFKFB3-214ENST00000490474 TNIKQ9UKE5 1360 aa31.9■■■□□ 2.7
PFKFB3-214ENST00000490474 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
PFKFB3-214ENST00000490474 UBTFP17480 764 aaKnown RBP31.82■■■□□ 2.68
PFKFB3-214ENST00000490474 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
PFKFB3-214ENST00000490474 CEP162Q5TB80 1403 aa31.8■■■□□ 2.68
PFKFB3-214ENST00000490474 KIF27Q86VH2 1401 aa31.8■■■□□ 2.68
PFKFB3-214ENST00000490474 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
PFKFB3-214ENST00000490474 PDS5BQ9NTI5 1447 aa31.73■■■□□ 2.67
PFKFB3-214ENST00000490474 RAPGEF2Q9Y4G8 1499 aa31.73■■■□□ 2.67
PFKFB3-214ENST00000490474 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
PFKFB3-214ENST00000490474 PCGF6Q9BYE7 350 aa31.7■■■□□ 2.67
PFKFB3-214ENST00000490474 ERICH3Q5RHP9 1530 aa31.69■■■□□ 2.66
PFKFB3-214ENST00000490474 CUX2O14529 1486 aa31.67■■■□□ 2.66
PFKFB3-214ENST00000490474 PRXQ9BXM0 1461 aa31.67■■■□□ 2.66
PFKFB3-214ENST00000490474 URB2Q14146 1524 aaKnown RBP31.62■■■□□ 2.65
PFKFB3-214ENST00000490474 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
PFKFB3-214ENST00000490474 TRIM26Q12899 539 aaPredicted RBP31.58■■■□□ 2.65
PFKFB3-214ENST00000490474 ABCA10Q8WWZ4 1543 aa31.52■■■□□ 2.64
PFKFB3-214ENST00000490474 RAD54L2Q9Y4B4 1467 aa31.51■■■□□ 2.64
PFKFB3-214ENST00000490474 WDR97A6NE52 1622 aa31.48■■■□□ 2.63
PFKFB3-214ENST00000490474 CLIP1P30622 1438 aa31.47■■■□□ 2.63
PFKFB3-214ENST00000490474 IGF1RP08069 1367 aa31.45■■■□□ 2.63
PFKFB3-214ENST00000490474 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
PFKFB3-214ENST00000490474 CARMIL1Q5VZK9 1371 aa31.33■■■□□ 2.61
PFKFB3-214ENST00000490474 CUL7Q14999 1698 aa31.3■■■□□ 2.6
PFKFB3-214ENST00000490474 PPARGC1BQ86YN6 1023 aaKnown RBP31.29■■■□□ 2.6
PFKFB3-214ENST00000490474 ABCA5Q8WWZ7 1642 aa31.28■■■□□ 2.6
PFKFB3-214ENST00000490474 RANGAP1P46060 587 aaPredicted RBP31.26■■■□□ 2.59
PFKFB3-214ENST00000490474 TARBP1Q13395 1621 aaKnown RBP31.26■■■□□ 2.59
PFKFB3-214ENST00000490474 VPS8Q8N3P4 1428 aa31.24■■■□□ 2.59
PFKFB3-214ENST00000490474 WDR62O43379 1518 aa31.17■■■□□ 2.58
PFKFB3-214ENST00000490474 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
PFKFB3-214ENST00000490474 TDRD9Q8NDG6 1382 aaKnown RBP31.15■■■□□ 2.58
PFKFB3-214ENST00000490474 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
PFKFB3-214ENST00000490474 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
PFKFB3-214ENST00000490474 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
PFKFB3-214ENST00000490474 CTTNBP2Q8WZ74 1663 aa31.07■■■□□ 2.56
PFKFB3-214ENST00000490474 ARHGAP35Q9NRY4 1499 aa31.06■■■□□ 2.56
PFKFB3-214ENST00000490474 THOC2Q8NI27 1593 aaKnown RBP31.04■■■□□ 2.56
PFKFB3-214ENST00000490474 HRCP23327 699 aa31.04■■■□□ 2.56
PFKFB3-214ENST00000490474 TTBK1Q5TCY1 1321 aaPredicted RBP31.01■■■□□ 2.55
PFKFB3-214ENST00000490474 IFT140Q96RY7 1462 aa30.99■■■□□ 2.55
PFKFB3-214ENST00000490474 APLP2Q06481 763 aa30.95■■■□□ 2.55
PFKFB3-214ENST00000490474 AQRO60306 1485 aaKnown RBP eCLIP30.91■■■□□ 2.545e-7■■■■■ 37.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms