RNA–Protein interactions for RNA: ENST00000414237.5

PFKFB3-206, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 1 (best)

Gene PFKFB3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-206ENST00000414237 NISCHQ9Y2I1 1504 aa30.77■■■□□ 2.52
PFKFB3-206ENST00000414237 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
PFKFB3-206ENST00000414237 ABCC9O60706 1549 aa26.24■■□□□ 1.79
PFKFB3-206ENST00000414237 ZCCHC6Q5VYS8 1495 aaKnown RBP25.71■■□□□ 1.71
PFKFB3-206ENST00000414237 NACADO15069 1562 aa25.54■■□□□ 1.68
PFKFB3-206ENST00000414237 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
PFKFB3-206ENST00000414237 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
PFKFB3-206ENST00000414237 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
PFKFB3-206ENST00000414237 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
PFKFB3-206ENST00000414237 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
PFKFB3-206ENST00000414237 SCRIBQ14160 1630 aa24.83■■□□□ 1.56
PFKFB3-206ENST00000414237 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
PFKFB3-206ENST00000414237 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
PFKFB3-206ENST00000414237 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
PFKFB3-206ENST00000414237 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
PFKFB3-206ENST00000414237 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
PFKFB3-206ENST00000414237 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
PFKFB3-206ENST00000414237 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
PFKFB3-206ENST00000414237 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
PFKFB3-206ENST00000414237 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
PFKFB3-206ENST00000414237 MROH2BQ7Z745 1585 aa23.68■■□□□ 1.38
PFKFB3-206ENST00000414237 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
PFKFB3-206ENST00000414237 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
PFKFB3-206ENST00000414237 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
PFKFB3-206ENST00000414237 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
PFKFB3-206ENST00000414237 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
PFKFB3-206ENST00000414237 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
PFKFB3-206ENST00000414237 WIZO95785 1651 aa23.45■■□□□ 1.34
PFKFB3-206ENST00000414237 BAZ1BQ9UIG0 1483 aaKnown RBP23.42■■□□□ 1.34
PFKFB3-206ENST00000414237 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
PFKFB3-206ENST00000414237 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
PFKFB3-206ENST00000414237 CCDC88BA6NC98 1476 aa22.94■■□□□ 1.26
PFKFB3-206ENST00000414237 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
PFKFB3-206ENST00000414237 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
PFKFB3-206ENST00000414237 NESP48681 1621 aa22.8■■□□□ 1.24
PFKFB3-206ENST00000414237 CFTRP13569 1480 aa22.79■■□□□ 1.24
PFKFB3-206ENST00000414237 PRDM2Q13029 1718 aa22.72■■□□□ 1.23
PFKFB3-206ENST00000414237 PDS5BQ9NTI5 1447 aa22.7■■□□□ 1.22
PFKFB3-206ENST00000414237 ERCC6Q03468 1493 aa22.63■■□□□ 1.21
PFKFB3-206ENST00000414237 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
PFKFB3-206ENST00000414237 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
PFKFB3-206ENST00000414237 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
PFKFB3-206ENST00000414237 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
PFKFB3-206ENST00000414237 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
PFKFB3-206ENST00000414237 WDR62O43379 1518 aa22.36■■□□□ 1.17
PFKFB3-206ENST00000414237 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
PFKFB3-206ENST00000414237 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
PFKFB3-206ENST00000414237 CUX2O14529 1486 aa22.31■■□□□ 1.16
PFKFB3-206ENST00000414237 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
PFKFB3-206ENST00000414237 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
PFKFB3-206ENST00000414237 CUX1P39880 1505 aa22.2■■□□□ 1.14
PFKFB3-206ENST00000414237 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
PFKFB3-206ENST00000414237 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
PFKFB3-206ENST00000414237 TOP2BQ02880 1626 aa22.14■■□□□ 1.14
PFKFB3-206ENST00000414237 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
PFKFB3-206ENST00000414237 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
PFKFB3-206ENST00000414237 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.12
PFKFB3-206ENST00000414237 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
PFKFB3-206ENST00000414237 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
PFKFB3-206ENST00000414237 SOGA1O94964 1423 aa21.99■■□□□ 1.11
PFKFB3-206ENST00000414237 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
PFKFB3-206ENST00000414237 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
PFKFB3-206ENST00000414237 ABCA10Q8WWZ4 1543 aa21.91■■□□□ 1.1
PFKFB3-206ENST00000414237 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
PFKFB3-206ENST00000414237 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
PFKFB3-206ENST00000414237 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
PFKFB3-206ENST00000414237 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
PFKFB3-206ENST00000414237 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.086e-10■■■■■ 42.5
PFKFB3-206ENST00000414237 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
PFKFB3-206ENST00000414237 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
PFKFB3-206ENST00000414237 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.07
PFKFB3-206ENST00000414237 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
PFKFB3-206ENST00000414237 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
PFKFB3-206ENST00000414237 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
PFKFB3-206ENST00000414237 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
PFKFB3-206ENST00000414237 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
PFKFB3-206ENST00000414237 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
PFKFB3-206ENST00000414237 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
PFKFB3-206ENST00000414237 CUL7Q14999 1698 aa21.56■■□□□ 1.04
PFKFB3-206ENST00000414237 EEA1Q15075 1411 aa21.56■■□□□ 1.04
PFKFB3-206ENST00000414237 IGF1RP08069 1367 aa21.56■■□□□ 1.04
PFKFB3-206ENST00000414237 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
PFKFB3-206ENST00000414237 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
PFKFB3-206ENST00000414237 FHAD1B1AJZ9 1412 aa21.53■■□□□ 1.04
PFKFB3-206ENST00000414237 CHD1O14646 1710 aa21.52■■□□□ 1.04
PFKFB3-206ENST00000414237 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
PFKFB3-206ENST00000414237 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
PFKFB3-206ENST00000414237 FBLN2P98095 1184 aa21.44■■□□□ 1.02
PFKFB3-206ENST00000414237 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
PFKFB3-206ENST00000414237 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
PFKFB3-206ENST00000414237 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
PFKFB3-206ENST00000414237 PRXQ9BXM0 1461 aa21.38■■□□□ 1.01
PFKFB3-206ENST00000414237 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
PFKFB3-206ENST00000414237 FAM9AQ8IZU1 332 aaPredicted RBP21.34■■□□□ 1.01
PFKFB3-206ENST00000414237 NUP160Q12769 1436 aa21.34■■□□□ 1.01
PFKFB3-206ENST00000414237 CEP170Q5SW79 1584 aa21.31■■□□□ 1
PFKFB3-206ENST00000414237 KIF21BO75037 1637 aa21.3■■□□□ 1
PFKFB3-206ENST00000414237 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
PFKFB3-206ENST00000414237 KIAA0586Q9BVV6 1533 aa21.21■□□□□ 0.99
PFKFB3-206ENST00000414237 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms