RNA–Protein interactions for RNA: ENST00000481878.1

VAMP2-203, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VAMP2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-203ENST00000481878 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
VAMP2-203ENST00000481878 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
VAMP2-203ENST00000481878 ABCC9O60706 1549 aa27.27■■□□□ 1.96
VAMP2-203ENST00000481878 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
VAMP2-203ENST00000481878 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
VAMP2-203ENST00000481878 NACADO15069 1562 aa26.01■■□□□ 1.75
VAMP2-203ENST00000481878 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
VAMP2-203ENST00000481878 MYO15BQ96JP2 1530 aa25.81■■□□□ 1.72
VAMP2-203ENST00000481878 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
VAMP2-203ENST00000481878 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
VAMP2-203ENST00000481878 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
VAMP2-203ENST00000481878 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
VAMP2-203ENST00000481878 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
VAMP2-203ENST00000481878 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
VAMP2-203ENST00000481878 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
VAMP2-203ENST00000481878 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
VAMP2-203ENST00000481878 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
VAMP2-203ENST00000481878 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
VAMP2-203ENST00000481878 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
VAMP2-203ENST00000481878 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
VAMP2-203ENST00000481878 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
VAMP2-203ENST00000481878 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
VAMP2-203ENST00000481878 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
VAMP2-203ENST00000481878 SMARCA2P51531 1590 aa23.95■■□□□ 1.43
VAMP2-203ENST00000481878 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
VAMP2-203ENST00000481878 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
VAMP2-203ENST00000481878 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
VAMP2-203ENST00000481878 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
VAMP2-203ENST00000481878 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
VAMP2-203ENST00000481878 WIZO95785 1651 aa23.64■■□□□ 1.37
VAMP2-203ENST00000481878 NESP48681 1621 aa23.56■■□□□ 1.36
VAMP2-203ENST00000481878 ERCC6Q03468 1493 aa23.47■■□□□ 1.35
VAMP2-203ENST00000481878 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
VAMP2-203ENST00000481878 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
VAMP2-203ENST00000481878 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
VAMP2-203ENST00000481878 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
VAMP2-203ENST00000481878 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
VAMP2-203ENST00000481878 CUX2O14529 1486 aa23.27■■□□□ 1.32
VAMP2-203ENST00000481878 CFTRP13569 1480 aa23.18■■□□□ 1.3
VAMP2-203ENST00000481878 KIF21AQ7Z4S6 1674 aa23.17■■□□□ 1.3
VAMP2-203ENST00000481878 THOC2Q8NI27 1593 aaKnown RBP23.16■■□□□ 1.3
VAMP2-203ENST00000481878 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
VAMP2-203ENST00000481878 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.29
VAMP2-203ENST00000481878 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
VAMP2-203ENST00000481878 CEP164Q9UPV0 1460 aa23.03■■□□□ 1.28
VAMP2-203ENST00000481878 WDR62O43379 1518 aa22.96■■□□□ 1.27
VAMP2-203ENST00000481878 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
VAMP2-203ENST00000481878 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
VAMP2-203ENST00000481878 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
VAMP2-203ENST00000481878 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
VAMP2-203ENST00000481878 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
VAMP2-203ENST00000481878 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
VAMP2-203ENST00000481878 DNMBPQ6XZF7 1577 aa22.6■■□□□ 1.21
VAMP2-203ENST00000481878 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
VAMP2-203ENST00000481878 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
VAMP2-203ENST00000481878 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
VAMP2-203ENST00000481878 CUX1P39880 1505 aa22.47■■□□□ 1.19
VAMP2-203ENST00000481878 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
VAMP2-203ENST00000481878 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
VAMP2-203ENST00000481878 SOGA1O94964 1423 aa22.42■■□□□ 1.18
VAMP2-203ENST00000481878 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
VAMP2-203ENST00000481878 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.185e-13■■■■■ 50.8
VAMP2-203ENST00000481878 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
VAMP2-203ENST00000481878 OSCARQ8IYS5 282 aa22.35■■□□□ 1.17
VAMP2-203ENST00000481878 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
VAMP2-203ENST00000481878 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
VAMP2-203ENST00000481878 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
VAMP2-203ENST00000481878 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
VAMP2-203ENST00000481878 ABCA10Q8WWZ4 1543 aa22.17■■□□□ 1.14
VAMP2-203ENST00000481878 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
VAMP2-203ENST00000481878 FBLN2P98095 1184 aa22.16■■□□□ 1.14
VAMP2-203ENST00000481878 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
VAMP2-203ENST00000481878 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
VAMP2-203ENST00000481878 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
VAMP2-203ENST00000481878 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
VAMP2-203ENST00000481878 MAGI1Q96QZ7 1491 aaPredicted RBP22.08■■□□□ 1.12
VAMP2-203ENST00000481878 CHD1O14646 1710 aa22.07■■□□□ 1.12
VAMP2-203ENST00000481878 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
VAMP2-203ENST00000481878 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
VAMP2-203ENST00000481878 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
VAMP2-203ENST00000481878 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
VAMP2-203ENST00000481878 PBRM1Q86U86 1689 aa21.99■■□□□ 1.11
VAMP2-203ENST00000481878 ARHGEF11O15085 1522 aa21.95■■□□□ 1.1
VAMP2-203ENST00000481878 RIMBP3CA6NJZ7 1639 aa21.93■■□□□ 1.1
VAMP2-203ENST00000481878 RIMBP3BA6NNM3 1639 aa21.93■■□□□ 1.1
VAMP2-203ENST00000481878 RIMBP3Q9UFD9 1639 aa21.93■■□□□ 1.1
VAMP2-203ENST00000481878 CLASP1Q7Z460 1538 aa21.89■■□□□ 1.09
VAMP2-203ENST00000481878 ERICH3Q5RHP9 1530 aa21.88■■□□□ 1.09
VAMP2-203ENST00000481878 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
VAMP2-203ENST00000481878 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
VAMP2-203ENST00000481878 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
VAMP2-203ENST00000481878 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
VAMP2-203ENST00000481878 IGF1RP08069 1367 aa21.8■■□□□ 1.08
VAMP2-203ENST00000481878 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
VAMP2-203ENST00000481878 NUP160Q12769 1436 aa21.79■■□□□ 1.08
VAMP2-203ENST00000481878 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
VAMP2-203ENST00000481878 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
VAMP2-203ENST00000481878 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
VAMP2-203ENST00000481878 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
VAMP2-203ENST00000481878 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms