RNA–Protein interactions for RNA: ENST00000461744.5

PFKFB3-209, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 5

Gene PFKFB3, Length 2,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-209ENST00000461744 NISCHQ9Y2I1 1504 aa40.12■■■■■ 4.01
PFKFB3-209ENST00000461744 CCDC180Q9P1Z9 1646 aa34.93■■■■□ 3.18
PFKFB3-209ENST00000461744 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.99
PFKFB3-209ENST00000461744 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
PFKFB3-209ENST00000461744 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
PFKFB3-209ENST00000461744 ABCC9O60706 1549 aa33.01■■■□□ 2.88
PFKFB3-209ENST00000461744 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.84
PFKFB3-209ENST00000461744 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
PFKFB3-209ENST00000461744 NACADO15069 1562 aa32.57■■■□□ 2.8
PFKFB3-209ENST00000461744 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
PFKFB3-209ENST00000461744 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
PFKFB3-209ENST00000461744 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
PFKFB3-209ENST00000461744 SUPT5HO00267 1087 aaKnown RBP31.46■■■□□ 2.63
PFKFB3-209ENST00000461744 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
PFKFB3-209ENST00000461744 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
PFKFB3-209ENST00000461744 PABPN1Q86U42 306 aaKnown RBP eCLIP31.16■■■□□ 2.58
PFKFB3-209ENST00000461744 RSF1Q96T23 1441 aaPredicted RBP31.14■■■□□ 2.58
PFKFB3-209ENST00000461744 MROH2BQ7Z745 1585 aa30.98■■■□□ 2.55
PFKFB3-209ENST00000461744 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
PFKFB3-209ENST00000461744 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
PFKFB3-209ENST00000461744 WIZO95785 1651 aa30.69■■■□□ 2.5
PFKFB3-209ENST00000461744 PEG3Q9GZU2 1588 aa30.47■■■□□ 2.47
PFKFB3-209ENST00000461744 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
PFKFB3-209ENST00000461744 EIF4G1Q04637 1599 aaKnown RBP30.34■■■□□ 2.45
PFKFB3-209ENST00000461744 ATAD2BQ9ULI0 1458 aa30.33■■■□□ 2.45
PFKFB3-209ENST00000461744 SMARCA2P51531 1590 aa30.29■■■□□ 2.44
PFKFB3-209ENST00000461744 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
PFKFB3-209ENST00000461744 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
PFKFB3-209ENST00000461744 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
PFKFB3-209ENST00000461744 NCAPD3P42695 1498 aa30.09■■■□□ 2.41
PFKFB3-209ENST00000461744 HMGXB3Q12766 1538 aa30.02■■■□□ 2.4
PFKFB3-209ENST00000461744 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
PFKFB3-209ENST00000461744 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
PFKFB3-209ENST00000461744 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
PFKFB3-209ENST00000461744 CFTRP13569 1480 aa29.41■■■□□ 2.3
PFKFB3-209ENST00000461744 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
PFKFB3-209ENST00000461744 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
PFKFB3-209ENST00000461744 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
PFKFB3-209ENST00000461744 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
PFKFB3-209ENST00000461744 SYNJ1O43426 1573 aa29.14■■■□□ 2.26
PFKFB3-209ENST00000461744 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
PFKFB3-209ENST00000461744 FAM9AQ8IZU1 332 aaPredicted RBP29.02■■■□□ 2.24
PFKFB3-209ENST00000461744 LOC105371045A0A1W2PR82 267 aa29.01■■■□□ 2.24
PFKFB3-209ENST00000461744 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.24
PFKFB3-209ENST00000461744 NESP48681 1621 aa29■■■□□ 2.23
PFKFB3-209ENST00000461744 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
PFKFB3-209ENST00000461744 CUX1P39880 1505 aa28.97■■■□□ 2.23
PFKFB3-209ENST00000461744 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
PFKFB3-209ENST00000461744 SOGA1O94964 1423 aa28.93■■■□□ 2.22
PFKFB3-209ENST00000461744 EEA1Q15075 1411 aa28.9■■■□□ 2.22
PFKFB3-209ENST00000461744 RUSC2Q8N2Y8 1516 aa28.81■■■□□ 2.2
PFKFB3-209ENST00000461744 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
PFKFB3-209ENST00000461744 CEP164Q9UPV0 1460 aa28.76■■■□□ 2.19
PFKFB3-209ENST00000461744 CSRNP3Q8WYN3 585 aa28.74■■■□□ 2.19
PFKFB3-209ENST00000461744 DNMBPQ6XZF7 1577 aa28.7■■■□□ 2.18
PFKFB3-209ENST00000461744 TOPBP1Q92547 1522 aa28.65■■■□□ 2.18
PFKFB3-209ENST00000461744 FGD5Q6ZNL6 1462 aa28.64■■■□□ 2.18
PFKFB3-209ENST00000461744 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
PFKFB3-209ENST00000461744 KIF21AQ7Z4S6 1674 aa28.6■■■□□ 2.17
PFKFB3-209ENST00000461744 EHMT2Q96KQ7 1210 aa28.57■■■□□ 2.16
PFKFB3-209ENST00000461744 KIF27Q86VH2 1401 aa28.55■■■□□ 2.16
PFKFB3-209ENST00000461744 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
PFKFB3-209ENST00000461744 KIF21BO75037 1637 aa28.49■■■□□ 2.15
PFKFB3-209ENST00000461744 GOLGA3Q08378 1498 aa28.47■■■□□ 2.15
PFKFB3-209ENST00000461744 CUX2O14529 1486 aa28.46■■■□□ 2.15
PFKFB3-209ENST00000461744 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
PFKFB3-209ENST00000461744 TNIKQ9UKE5 1360 aa28.43■■■□□ 2.14
PFKFB3-209ENST00000461744 ABCA10Q8WWZ4 1543 aa28.41■■■□□ 2.14
PFKFB3-209ENST00000461744 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
PFKFB3-209ENST00000461744 PRXQ9BXM0 1461 aa28.39■■■□□ 2.14
PFKFB3-209ENST00000461744 RAPGEF2Q9Y4G8 1499 aa28.34■■■□□ 2.13
PFKFB3-209ENST00000461744 IGF1RP08069 1367 aa28.33■■■□□ 2.13
PFKFB3-209ENST00000461744 UBTFP17480 764 aaKnown RBP28.33■■■□□ 2.13
PFKFB3-209ENST00000461744 ERICH3Q5RHP9 1530 aa28.31■■■□□ 2.12
PFKFB3-209ENST00000461744 ERCC6Q03468 1493 aa28.29■■■□□ 2.12
PFKFB3-209ENST00000461744 WDR62O43379 1518 aa28.28■■■□□ 2.12
PFKFB3-209ENST00000461744 WDR97A6NE52 1622 aa28.27■■■□□ 2.12
PFKFB3-209ENST00000461744 CEP162Q5TB80 1403 aa28.24■■■□□ 2.11
PFKFB3-209ENST00000461744 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
PFKFB3-209ENST00000461744 CARMIL1Q5VZK9 1371 aa28.17■■■□□ 2.1
PFKFB3-209ENST00000461744 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
PFKFB3-209ENST00000461744 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
PFKFB3-209ENST00000461744 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
PFKFB3-209ENST00000461744 GAPVD1Q14C86 1478 aa28.1■■■□□ 2.09
PFKFB3-209ENST00000461744 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
PFKFB3-209ENST00000461744 CUL7Q14999 1698 aa28.04■■■□□ 2.08
PFKFB3-209ENST00000461744 CLIP1P30622 1438 aa28.02■■■□□ 2.08
PFKFB3-209ENST00000461744 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.076e-7■■■■■ 37.4
PFKFB3-209ENST00000461744 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
PFKFB3-209ENST00000461744 GRIN2BQ13224 1484 aa27.9■■■□□ 2.06
PFKFB3-209ENST00000461744 PBRM1Q86U86 1689 aa27.88■■■□□ 2.05
PFKFB3-209ENST00000461744 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
PFKFB3-209ENST00000461744 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
PFKFB3-209ENST00000461744 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
PFKFB3-209ENST00000461744 TRIM26Q12899 539 aaPredicted RBP27.81■■■□□ 2.04
PFKFB3-209ENST00000461744 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
PFKFB3-209ENST00000461744 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
PFKFB3-209ENST00000461744 ADAMTS12P58397 1594 aa27.78■■■□□ 2.04
PFKFB3-209ENST00000461744 ARAP1Q96P48 1450 aa27.75■■■□□ 2.03
PFKFB3-209ENST00000461744 ARHGAP35Q9NRY4 1499 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms