RNA–Protein interactions for RNA: ENST00000530014.5

NDUFV1-217, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 5

Gene NDUFV1, Length 766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-217ENST00000530014 NISCHQ9Y2I1 1504 aa53■■■■■ 6.07
NDUFV1-217ENST00000530014 CCDC180Q9P1Z9 1646 aa47.28■■■■■ 5.16
NDUFV1-217ENST00000530014 ABCC9O60706 1549 aa47.19■■■■■ 5.14
NDUFV1-217ENST00000530014 RB1CC1Q8TDY2 1594 aa44.94■■■■■ 4.78
NDUFV1-217ENST00000530014 DCAF8L2P0C7V8 631 aa44.75■■■■■ 4.75
NDUFV1-217ENST00000530014 NACADO15069 1562 aa44.71■■■■■ 4.75
NDUFV1-217ENST00000530014 MYO15BQ96JP2 1530 aa44.19■■■■■ 4.66
NDUFV1-217ENST00000530014 DNAJC5BQ9UF47 199 aa44.14■■■■■ 4.66
NDUFV1-217ENST00000530014 PABPN1Q86U42 306 aaKnown RBP eCLIP44.08■■■■■ 4.65
NDUFV1-217ENST00000530014 ZCCHC6Q5VYS8 1495 aaKnown RBP43.96■■■■■ 4.63
NDUFV1-217ENST00000530014 UNC13AQ9UPW8 1703 aa43.88■■■■■ 4.62
NDUFV1-217ENST00000530014 DCAF1Q9Y4B6 1507 aa43.74■■■■■ 4.59
NDUFV1-217ENST00000530014 BICRAQ9NZM4 1560 aa43.67■■■■■ 4.58
NDUFV1-217ENST00000530014 SCRIBQ14160 1630 aa43.22■■■■■ 4.51
NDUFV1-217ENST00000530014 SHROOM4Q9ULL8 1493 aa43.01■■■■■ 4.48
NDUFV1-217ENST00000530014 CC2D2AQ9P2K1 1620 aa42.58■■■■■ 4.41
NDUFV1-217ENST00000530014 EIF4G1Q04637 1599 aaKnown RBP42.56■■■■■ 4.4
NDUFV1-217ENST00000530014 CECR2Q9BXF3 1484 aa42.46■■■■■ 4.39
NDUFV1-217ENST00000530014 NCAPD3P42695 1498 aa41.34■■■■■ 4.21
NDUFV1-217ENST00000530014 ATAD2BQ9ULI0 1458 aa41.27■■■■■ 4.2
NDUFV1-217ENST00000530014 SMARCA4P51532 1647 aa41.23■■■■■ 4.19
NDUFV1-217ENST00000530014 SMARCA2P51531 1590 aa41.08■■■■■ 4.17
NDUFV1-217ENST00000530014 BAZ1AQ9NRL2 1556 aaPredicted RBP41.07■■■■■ 4.16
NDUFV1-217ENST00000530014 HMGXB3Q12766 1538 aa40.98■■■■■ 4.15
NDUFV1-217ENST00000530014 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
NDUFV1-217ENST00000530014 BAZ1BQ9UIG0 1483 aaKnown RBP40.84■■■■■ 4.13
NDUFV1-217ENST00000530014 PEG3Q9GZU2 1588 aa40.82■■■■■ 4.12
NDUFV1-217ENST00000530014 ERCC6Q03468 1493 aa40.68■■■■■ 4.1
NDUFV1-217ENST00000530014 NESP48681 1621 aa40.64■■■■■ 4.1
NDUFV1-217ENST00000530014 CUX2O14529 1486 aa40.46■■■■■ 4.07
NDUFV1-217ENST00000530014 WIZO95785 1651 aa40.36■■■■■ 4.05
NDUFV1-217ENST00000530014 LAMC3Q9Y6N6 1575 aa40.28■■■■■ 4.04
NDUFV1-217ENST00000530014 DNAJC5Q9H3Z4 198 aa40.25■■■■■ 4.03
NDUFV1-217ENST00000530014 RSF1Q96T23 1441 aaPredicted RBP40.16■■■■■ 4.02
NDUFV1-217ENST00000530014 CADPSQ9ULU8 1353 aa40.13■■■■■ 4.02
NDUFV1-217ENST00000530014 PDS5BQ9NTI5 1447 aa40.11■■■■■ 4.01
NDUFV1-217ENST00000530014 THOC2Q8NI27 1593 aaKnown RBP40.05■■■■■ 4
NDUFV1-217ENST00000530014 KIF21AQ7Z4S6 1674 aa40■■■■□ 3.99
NDUFV1-217ENST00000530014 TOP2AP11388 1531 aaKnown RBP39.84■■■■□ 3.97
NDUFV1-217ENST00000530014 MRC2Q9UBG0 1479 aa39.73■■■■□ 3.95
NDUFV1-217ENST00000530014 CFTRP13569 1480 aa39.7■■■■□ 3.95
NDUFV1-217ENST00000530014 FANCD2Q9BXW9 1451 aa39.64■■■■□ 3.94
NDUFV1-217ENST00000530014 CEP164Q9UPV0 1460 aa39.62■■■■□ 3.93
NDUFV1-217ENST00000530014 WDR62O43379 1518 aa39.6■■■■□ 3.93
NDUFV1-217ENST00000530014 CCDC88BA6NC98 1476 aa39.47■■■■□ 3.91
NDUFV1-217ENST00000530014 URB2Q14146 1524 aaKnown RBP39.31■■■■□ 3.88
NDUFV1-217ENST00000530014 PRDM2Q13029 1718 aa39.14■■■■□ 3.86
NDUFV1-217ENST00000530014 TOPBP1Q92547 1522 aa38.92■■■■□ 3.82
NDUFV1-217ENST00000530014 IFT140Q96RY7 1462 aa38.83■■■■□ 3.81
NDUFV1-217ENST00000530014 ZNF608Q9ULD9 1512 aaPredicted RBP38.81■■■■□ 3.8
NDUFV1-217ENST00000530014 ABCC8Q09428 1581 aa38.81■■■■□ 3.8
NDUFV1-217ENST00000530014 OSCARQ8IYS5 282 aa38.79■■■■□ 3.8
NDUFV1-217ENST00000530014 DNMBPQ6XZF7 1577 aa38.75■■■■□ 3.79
NDUFV1-217ENST00000530014 SUPT5HO00267 1087 aaKnown RBP38.69■■■■□ 3.78
NDUFV1-217ENST00000530014 TRIM41Q8WV44 630 aa38.62■■■■□ 3.77
NDUFV1-217ENST00000530014 POLA1P09884 1462 aaPredicted RBP38.54■■■■□ 3.76
NDUFV1-217ENST00000530014 TARBP1Q13395 1621 aaKnown RBP38.52■■■■□ 3.76
NDUFV1-217ENST00000530014 AQRO60306 1485 aaKnown RBP eCLIP38.51■■■■□ 3.765e-7■■■□□ 16.8
NDUFV1-217ENST00000530014 EIF4G3O43432 1585 aaKnown RBP38.49■■■■□ 3.75
NDUFV1-217ENST00000530014 RAD54L2Q9Y4B4 1467 aa38.46■■■■□ 3.75
NDUFV1-217ENST00000530014 SOGA1O94964 1423 aa38.41■■■■□ 3.74
NDUFV1-217ENST00000530014 CUX1P39880 1505 aa38.37■■■■□ 3.73
NDUFV1-217ENST00000530014 FGD5Q6ZNL6 1462 aa38.35■■■■□ 3.73
NDUFV1-217ENST00000530014 TDRD9Q8NDG6 1382 aaKnown RBP38.34■■■■□ 3.73
NDUFV1-217ENST00000530014 FBLN2P98095 1184 aa38.23■■■■□ 3.71
NDUFV1-217ENST00000530014 RIMBP3CA6NJZ7 1639 aa38.14■■■■□ 3.7
NDUFV1-217ENST00000530014 RIMBP3BA6NNM3 1639 aa38.14■■■■□ 3.7
NDUFV1-217ENST00000530014 RIMBP3Q9UFD9 1639 aa38.14■■■■□ 3.7
NDUFV1-217ENST00000530014 CHD1O14646 1710 aa38.13■■■■□ 3.69
NDUFV1-217ENST00000530014 ARHGEF11O15085 1522 aa38.07■■■■□ 3.69
NDUFV1-217ENST00000530014 SNAPC4Q5SXM2 1469 aa38.06■■■■□ 3.68
NDUFV1-217ENST00000530014 WDR97A6NE52 1622 aa38.05■■■■□ 3.68
NDUFV1-217ENST00000530014 GRIN2BQ13224 1484 aa38■■■■□ 3.67
NDUFV1-217ENST00000530014 CHMP7Q8WUX9 453 aaPredicted RBP37.97■■■■□ 3.67
NDUFV1-217ENST00000530014 MAGI1Q96QZ7 1491 aaPredicted RBP37.94■■■■□ 3.66
NDUFV1-217ENST00000530014 GAPVD1Q14C86 1478 aa37.92■■■■□ 3.66
NDUFV1-217ENST00000530014 ABCA10Q8WWZ4 1543 aa37.92■■■■□ 3.66
NDUFV1-217ENST00000530014 CYB5RLQ6IPT4 315 aa37.9■■■■□ 3.66
NDUFV1-217ENST00000530014 WRNQ14191 1432 aaPredicted RBP eCLIP37.85■■■■□ 3.65
NDUFV1-217ENST00000530014 SYNJ2O15056 1496 aa37.84■■■■□ 3.65
NDUFV1-217ENST00000530014 TOP2BQ02880 1626 aa37.78■■■■□ 3.64
NDUFV1-217ENST00000530014 ABCA5Q8WWZ7 1642 aa37.78■■■■□ 3.64
NDUFV1-217ENST00000530014 SYNJ1O43426 1573 aa37.77■■■■□ 3.64
NDUFV1-217ENST00000530014 PBRM1Q86U86 1689 aa37.76■■■■□ 3.64
NDUFV1-217ENST00000530014 CLASP1Q7Z460 1538 aa37.76■■■■□ 3.63
NDUFV1-217ENST00000530014 ARAP1Q96P48 1450 aa37.75■■■■□ 3.63
NDUFV1-217ENST00000530014 BIVM-ERCC5R4GMW8 1640 aa37.74■■■■□ 3.63
NDUFV1-217ENST00000530014 GRIN2AQ12879 1464 aa37.5■■■■□ 3.59
NDUFV1-217ENST00000530014 ADAMTS12P58397 1594 aa37.47■■■■□ 3.59
NDUFV1-217ENST00000530014 FHAD1B1AJZ9 1412 aa37.44■■■■□ 3.58
NDUFV1-217ENST00000530014 ERICH3Q5RHP9 1530 aa37.41■■■■□ 3.58
NDUFV1-217ENST00000530014 NUP160Q12769 1436 aa37.38■■■■□ 3.57
NDUFV1-217ENST00000530014 CEP170Q5SW79 1584 aa37.35■■■■□ 3.57
NDUFV1-217ENST00000530014 TRHP20396 242 aaPredicted RBP37.35■■■■□ 3.57
NDUFV1-217ENST00000530014 ERCC6L2Q5T890 1561 aa37.25■■■■□ 3.55
NDUFV1-217ENST00000530014 IGF1RP08069 1367 aa37.14■■■■□ 3.54
NDUFV1-217ENST00000530014 SHROOM2Q13796 1616 aa37.12■■■■□ 3.53
NDUFV1-217ENST00000530014 KIF27Q86VH2 1401 aa37.1■■■■□ 3.53
NDUFV1-217ENST00000530014 JPH4Q96JJ6 628 aa37.09■■■■□ 3.53
NDUFV1-217ENST00000530014 PRG4Q92954 1404 aaPredicted RBP37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms