RNA–Protein interactions for RNA: ENST00000475881.5

PFKFB3-211, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 1 (best)

Gene PFKFB3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-211ENST00000475881 NISCHQ9Y2I1 1504 aa41.96■■■■■ 4.31
PFKFB3-211ENST00000475881 CCDC180Q9P1Z9 1646 aa37.4■■■■□ 3.58
PFKFB3-211ENST00000475881 ABCC9O60706 1549 aa36.92■■■■□ 3.5
PFKFB3-211ENST00000475881 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
PFKFB3-211ENST00000475881 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.24
PFKFB3-211ENST00000475881 NACADO15069 1562 aa35.25■■■■□ 3.23
PFKFB3-211ENST00000475881 MYO15BQ96JP2 1530 aa34.92■■■■□ 3.18
PFKFB3-211ENST00000475881 ZCCHC6Q5VYS8 1495 aaKnown RBP34.88■■■■□ 3.17
PFKFB3-211ENST00000475881 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
PFKFB3-211ENST00000475881 UNC13AQ9UPW8 1703 aa34.53■■■■□ 3.12
PFKFB3-211ENST00000475881 PABPN1Q86U42 306 aaKnown RBP eCLIP34.48■■■■□ 3.11
PFKFB3-211ENST00000475881 BICRAQ9NZM4 1560 aa34.29■■■■□ 3.08
PFKFB3-211ENST00000475881 DNAJC5BQ9UF47 199 aa34.15■■■■□ 3.06
PFKFB3-211ENST00000475881 SCRIBQ14160 1630 aa34.14■■■■□ 3.06
PFKFB3-211ENST00000475881 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
PFKFB3-211ENST00000475881 EIF4G1Q04637 1599 aaKnown RBP33.42■■■□□ 2.94
PFKFB3-211ENST00000475881 CC2D2AQ9P2K1 1620 aa33.36■■■□□ 2.93
PFKFB3-211ENST00000475881 CECR2Q9BXF3 1484 aa33.2■■■□□ 2.91
PFKFB3-211ENST00000475881 SMARCA4P51532 1647 aa32.61■■■□□ 2.81
PFKFB3-211ENST00000475881 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
PFKFB3-211ENST00000475881 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
PFKFB3-211ENST00000475881 ATAD2BQ9ULI0 1458 aa32.52■■■□□ 2.8
PFKFB3-211ENST00000475881 SMARCA2P51531 1590 aa32.46■■■□□ 2.79
PFKFB3-211ENST00000475881 MROH2BQ7Z745 1585 aa32.34■■■□□ 2.77
PFKFB3-211ENST00000475881 HMGXB3Q12766 1538 aa32.33■■■□□ 2.77
PFKFB3-211ENST00000475881 PEG3Q9GZU2 1588 aa32.28■■■□□ 2.76
PFKFB3-211ENST00000475881 BAZ1BQ9UIG0 1483 aaKnown RBP32.24■■■□□ 2.75
PFKFB3-211ENST00000475881 WIZO95785 1651 aa31.98■■■□□ 2.71
PFKFB3-211ENST00000475881 RSF1Q96T23 1441 aaPredicted RBP31.87■■■□□ 2.69
PFKFB3-211ENST00000475881 NESP48681 1621 aa31.86■■■□□ 2.69
PFKFB3-211ENST00000475881 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
PFKFB3-211ENST00000475881 LAMC3Q9Y6N6 1575 aa31.71■■■□□ 2.67
PFKFB3-211ENST00000475881 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
PFKFB3-211ENST00000475881 CADPSQ9ULU8 1353 aa31.59■■■□□ 2.65
PFKFB3-211ENST00000475881 CUX2O14529 1486 aa31.59■■■□□ 2.65
PFKFB3-211ENST00000475881 PDS5BQ9NTI5 1447 aa31.55■■■□□ 2.64
PFKFB3-211ENST00000475881 KIF21AQ7Z4S6 1674 aa31.44■■■□□ 2.62
PFKFB3-211ENST00000475881 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
PFKFB3-211ENST00000475881 CFTRP13569 1480 aa31.33■■■□□ 2.61
PFKFB3-211ENST00000475881 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
PFKFB3-211ENST00000475881 FANCD2Q9BXW9 1451 aa31.22■■■□□ 2.59
PFKFB3-211ENST00000475881 MRC2Q9UBG0 1479 aa31.22■■■□□ 2.59
PFKFB3-211ENST00000475881 CEP164Q9UPV0 1460 aa31.21■■■□□ 2.59
PFKFB3-211ENST00000475881 WDR62O43379 1518 aa31.11■■■□□ 2.57
PFKFB3-211ENST00000475881 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
PFKFB3-211ENST00000475881 DNAJC5Q9H3Z4 198 aa30.98■■■□□ 2.55
PFKFB3-211ENST00000475881 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
PFKFB3-211ENST00000475881 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
PFKFB3-211ENST00000475881 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
PFKFB3-211ENST00000475881 ABCC8Q09428 1581 aa30.67■■■□□ 2.5
PFKFB3-211ENST00000475881 DNMBPQ6XZF7 1577 aa30.62■■■□□ 2.49
PFKFB3-211ENST00000475881 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
PFKFB3-211ENST00000475881 ZNF608Q9ULD9 1512 aaPredicted RBP30.46■■■□□ 2.47
PFKFB3-211ENST00000475881 POLA1P09884 1462 aaPredicted RBP30.41■■■□□ 2.46
PFKFB3-211ENST00000475881 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
PFKFB3-211ENST00000475881 CUX1P39880 1505 aa30.35■■■□□ 2.45
PFKFB3-211ENST00000475881 EIF4G3O43432 1585 aaKnown RBP30.31■■■□□ 2.44
PFKFB3-211ENST00000475881 SOGA1O94964 1423 aa30.3■■■□□ 2.44
PFKFB3-211ENST00000475881 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
PFKFB3-211ENST00000475881 RAD54L2Q9Y4B4 1467 aa30.3■■■□□ 2.44
PFKFB3-211ENST00000475881 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
PFKFB3-211ENST00000475881 AQRO60306 1485 aaKnown RBP eCLIP30.26■■■□□ 2.446e-10■■■■■ 42.5
PFKFB3-211ENST00000475881 TDRD9Q8NDG6 1382 aaKnown RBP30.17■■■□□ 2.42
PFKFB3-211ENST00000475881 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
PFKFB3-211ENST00000475881 WRNQ14191 1432 aaPredicted RBP eCLIP30.06■■■□□ 2.4
PFKFB3-211ENST00000475881 TOP2BQ02880 1626 aa30.01■■■□□ 2.39
PFKFB3-211ENST00000475881 FBLN2P98095 1184 aa30■■■□□ 2.39
PFKFB3-211ENST00000475881 BIVM-ERCC5R4GMW8 1640 aa30■■■□□ 2.39
PFKFB3-211ENST00000475881 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
PFKFB3-211ENST00000475881 ABCA10Q8WWZ4 1543 aa29.98■■■□□ 2.39
PFKFB3-211ENST00000475881 CHD1O14646 1710 aa29.98■■■□□ 2.39
PFKFB3-211ENST00000475881 GRIN2BQ13224 1484 aa29.97■■■□□ 2.39
PFKFB3-211ENST00000475881 SNAPC4Q5SXM2 1469 aa29.97■■■□□ 2.39
PFKFB3-211ENST00000475881 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
PFKFB3-211ENST00000475881 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
PFKFB3-211ENST00000475881 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
PFKFB3-211ENST00000475881 ABCA5Q8WWZ7 1642 aa29.88■■■□□ 2.37
PFKFB3-211ENST00000475881 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
PFKFB3-211ENST00000475881 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
PFKFB3-211ENST00000475881 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
PFKFB3-211ENST00000475881 RIMBP3CA6NJZ7 1639 aa29.78■■■□□ 2.36
PFKFB3-211ENST00000475881 RIMBP3BA6NNM3 1639 aa29.78■■■□□ 2.36
PFKFB3-211ENST00000475881 RIMBP3Q9UFD9 1639 aa29.78■■■□□ 2.36
PFKFB3-211ENST00000475881 ARHGEF11O15085 1522 aa29.74■■■□□ 2.35
PFKFB3-211ENST00000475881 CLASP1Q7Z460 1538 aa29.65■■■□□ 2.34
PFKFB3-211ENST00000475881 ERICH3Q5RHP9 1530 aa29.62■■■□□ 2.33
PFKFB3-211ENST00000475881 ADAMTS12P58397 1594 aa29.61■■■□□ 2.33
PFKFB3-211ENST00000475881 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
PFKFB3-211ENST00000475881 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
PFKFB3-211ENST00000475881 CYB5RLQ6IPT4 315 aa29.54■■■□□ 2.32
PFKFB3-211ENST00000475881 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
PFKFB3-211ENST00000475881 KIF27Q86VH2 1401 aa29.46■■■□□ 2.31
PFKFB3-211ENST00000475881 NUP160Q12769 1436 aa29.45■■■□□ 2.3
PFKFB3-211ENST00000475881 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
PFKFB3-211ENST00000475881 IGF1RP08069 1367 aa29.39■■■□□ 2.29
PFKFB3-211ENST00000475881 CUL7Q14999 1698 aa29.29■■■□□ 2.28
PFKFB3-211ENST00000475881 SHROOM2Q13796 1616 aa29.24■■■□□ 2.27
PFKFB3-211ENST00000475881 ERCC6L2Q5T890 1561 aa29.23■■■□□ 2.27
PFKFB3-211ENST00000475881 CARMIL1Q5VZK9 1371 aa29.21■■■□□ 2.27
PFKFB3-211ENST00000475881 JPH4Q96JJ6 628 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms