Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 AC135776.1-201ENST00000319817 2481 ntBASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-6A0A0B4J262 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 KRT18P6-201ENST00000555540 1265 ntBASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-6A0A0B4J262 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 KRT17P3-201ENST00000420566 1262 ntBASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 RPS2P52-201ENST00000469610 820 ntBASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 UNC93B4-201ENST00000505679 747 ntBASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 PRKY-204ENST00000533551 1019 ntBASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 AC008687.6-201ENST00000596318 630 ntBASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-6A0A0B4J262 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms