Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 SIRPAP1-201ENST00000448467 1770 ntBASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 LINC00896-202ENST00000609602 2128 ntBASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40AQ8WXH6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 TSPY21P-201ENST00000433481 731 ntBASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 AF186192.3-201ENST00000583427 947 ntBASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 AC113410.3-201ENST00000623366 203 ntBASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40AQ8WXH6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 TSPY7P-201ENST00000431358 1114 ntBASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 AP002982.1-201ENST00000492365 877 ntBASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 MIR4785-201ENST00000585005 73 ntBASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 AC134043.2-201ENST00000624206 2238 ntBASIC16.25■□□□□ 0.19
RAB40AQ8WXH6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40AQ8WXH6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms