Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RAB38P57729 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB38P57729 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB38P57729 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB38P57729 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB38P57729 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAB38P57729 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB38P57729 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB38P57729 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAB38P57729 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAB38P57729 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 AC005082.1-201ENST00000413042 2259 ntBASIC17.35■□□□□ 0.37
RAB38P57729 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB38P57729 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB38P57729 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB38P57729 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
RAB38P57729 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB38P57729 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB38P57729 PVRIG2P-201ENST00000435460 978 ntBASIC17.34■□□□□ 0.37
RAB38P57729 AC112907.2-201ENST00000448639 330 ntBASIC17.34■□□□□ 0.37
RAB38P57729 SDHAP2-201ENST00000455183 2001 ntBASIC17.34■□□□□ 0.37
RAB38P57729 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB38P57729 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB38P57729 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB38P57729 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAB38P57729 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RAB38P57729 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB38P57729 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB38P57729 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB38P57729 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAB38P57729 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB38P57729 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB38P57729 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.33■□□□□ 0.37
RAB38P57729 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB38P57729 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB38P57729 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB38P57729 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB38P57729 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB38P57729 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB38P57729 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB38P57729 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RAB38P57729 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB38P57729 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 AL590326.2-201ENST00000625139 305 ntBASIC17.33■□□□□ 0.36
RAB38P57729 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB38P57729 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB38P57729 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
RAB38P57729 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB38P57729 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB38P57729 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms