Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 SLC7A5P1-201ENST00000568957 537 ntBASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 AL136162.1-201ENST00000607711 1078 ntBASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 FEM1AP3-201ENST00000403722 1741 ntBASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CHTOPQ9Y3Y2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 SDHAP1-207ENST00000440850 2000 ntBASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 IRS3P-201ENST00000223076 1006 ntBASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 CICP14-201ENST00000629111 2732 ntBASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.29□□□□□ -0.28
CHTOPQ9Y3Y2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 GUSBP5-201ENST00000418136 578 ntBASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 AC135279.3-201ENST00000610945 1311 ntBASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms