Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN4IP1Q8WWV3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTN4IP1Q8WWV3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN4IP1Q8WWV3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.61■□□□□ 0.09
RTN4IP1Q8WWV3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN4IP1Q8WWV3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTN4IP1Q8WWV3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 NIFKP9-201ENST00000419265 221 ntBASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 AL353807.1-201ENST00000427475 662 ntBASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 AC098590.1-201ENST00000468126 897 ntBASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 AP002982.1-201ENST00000492365 877 ntBASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTN4IP1Q8WWV3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 RARRES2P10-201ENST00000564312 460 ntBASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 AL353708.3-201ENST00000610272 989 ntBASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN4IP1Q8WWV3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN4IP1Q8WWV3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms