Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 AL023875.1-201ENST00000640777 796 ntBASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 ESPNP-201ENST00000270691 2015 ntBASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CRLF3Q8IUI8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.54■□□□□ 0.56
CRLF3Q8IUI8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRLF3Q8IUI8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 AC239809.2-201ENST00000415381 517 ntBASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 AC124016.1-201ENST00000609552 612 ntBASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.52■□□□□ 0.56
CRLF3Q8IUI8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CRLF3Q8IUI8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CRLF3Q8IUI8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms