Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHMP24386 KRT8P41-201ENST00000533985 1514 ntBASIC17.36■□□□□ 0.37
CHMP24386 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHMP24386 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 ABALON-201ENST00000629058 1903 ntBASIC17.35■□□□□ 0.37
CHMP24386 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 AC008040.2-201ENST00000461049 708 ntBASIC17.35■□□□□ 0.37
CHMP24386 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.35■□□□□ 0.37
CHMP24386 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 AC096733.2-201ENST00000609937 1394 ntBASIC17.35■□□□□ 0.37
CHMP24386 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHMP24386 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP24386 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP24386 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 HCG11-201ENST00000411553 5696 ntBASIC17.34■□□□□ 0.37
CHMP24386 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHMP24386 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHMP24386 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.34■□□□□ 0.37
CHMP24386 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP24386 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP24386 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHMP24386 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP24386 SLC25A1P4-201ENST00000567977 778 ntBASIC17.34■□□□□ 0.37
CHMP24386 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.34■□□□□ 0.37
CHMP24386 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP24386 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP24386 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHMP24386 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP24386 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHMP24386 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP24386 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP24386 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.33■□□□□ 0.37
CHMP24386 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHMP24386 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMP24386 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMP24386 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP24386 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP24386 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CHMP24386 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP24386 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CHMP24386 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP24386 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CHMP24386 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP24386 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP24386 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP24386 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP24386 CRYGFP-201ENST00000418459 633 ntBASIC17.33■□□□□ 0.36
CHMP24386 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMP24386 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP24386 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP24386 NAPSB-206ENST00000562112 1266 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms