Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 AC097488.1-201ENST00000507834 756 ntBASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 REXO1L10P-201ENST00000615707 1290 ntBASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 REXO1L12P-201ENST00000622156 912 ntBASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
IGHV3-43DP0DP04 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 CRYGFP-201ENST00000418459 633 ntBASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 AC116562.2-201ENST00000507042 360 ntBASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 AC026471.5-201ENST00000615068 467 ntBASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IGHV3-43DP0DP04 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 AC008622.2-201ENST00000617006 1229 ntBASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 TMEM191A-211ENST00000637163 1067 ntBASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.42■□□□□ 0.06
IGHV3-43DP0DP04 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 AC135050.7-201ENST00000624508 2218 ntBASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV3-43DP0DP04 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms