Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.62■□□□□ 0.25
PFDN1O60925 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN1O60925 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.62■□□□□ 0.25
PFDN1O60925 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.62■□□□□ 0.25
PFDN1O60925 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PFDN1O60925 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PFDN1O60925 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN1O60925 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 IRX1P1-201ENST00000438849 1838 ntBASIC16.61■□□□□ 0.25
PFDN1O60925 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PFDN1O60925 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PFDN1O60925 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PFDN1O60925 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.61■□□□□ 0.25
PFDN1O60925 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.61■□□□□ 0.25
PFDN1O60925 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PFDN1O60925 MIR639-201ENST00000384974 98 ntBASIC16.61■□□□□ 0.25
PFDN1O60925 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.61■□□□□ 0.25
PFDN1O60925 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
PFDN1O60925 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PFDN1O60925 AC138028.4-201ENST00000564984 1845 ntBASIC16.61■□□□□ 0.25
PFDN1O60925 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.61■□□□□ 0.25
PFDN1O60925 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN1O60925 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
PFDN1O60925 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.6■□□□□ 0.25
PFDN1O60925 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.6■□□□□ 0.25
PFDN1O60925 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PFDN1O60925 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.6■□□□□ 0.25
PFDN1O60925 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PFDN1O60925 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PFDN1O60925 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.59■□□□□ 0.25
PFDN1O60925 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN1O60925 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms