RNA–Protein interactions for RNA: ENST00000448884.6

CYB561-204, Transcript of cytochrome b561, humanhuman

TSL 2 BASIC

Gene CYB561, Length 1,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-204ENST00000448884 NISCHQ9Y2I1 1504 aa44.88■■■■■ 4.78
CYB561-204ENST00000448884 CCDC180Q9P1Z9 1646 aa39.3■■■■□ 3.88
CYB561-204ENST00000448884 ABCC9O60706 1549 aa38.96■■■■□ 3.83
CYB561-204ENST00000448884 ZCCHC6Q5VYS8 1495 aaKnown RBP37.69■■■■□ 3.62
CYB561-204ENST00000448884 DCAF1Q9Y4B6 1507 aa37.19■■■■□ 3.54
CYB561-204ENST00000448884 RB1CC1Q8TDY2 1594 aa36.98■■■■□ 3.51
CYB561-204ENST00000448884 DCAF8L2P0C7V8 631 aa36.93■■■■□ 3.5
CYB561-204ENST00000448884 MYO15BQ96JP2 1530 aa36.82■■■■□ 3.49
CYB561-204ENST00000448884 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
CYB561-204ENST00000448884 NACADO15069 1562 aa36.7■■■■□ 3.46
CYB561-204ENST00000448884 SHROOM4Q9ULL8 1493 aa36.34■■■■□ 3.41
CYB561-204ENST00000448884 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.39
CYB561-204ENST00000448884 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.39
CYB561-204ENST00000448884 BICRAQ9NZM4 1560 aa36■■■■□ 3.35
CYB561-204ENST00000448884 SCRIBQ14160 1630 aa35.99■■■■□ 3.35
CYB561-204ENST00000448884 CC2D2AQ9P2K1 1620 aa35.19■■■■□ 3.22
CYB561-204ENST00000448884 CECR2Q9BXF3 1484 aa35.1■■■■□ 3.21
CYB561-204ENST00000448884 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
CYB561-204ENST00000448884 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
CYB561-204ENST00000448884 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
CYB561-204ENST00000448884 BAZ1AQ9NRL2 1556 aaPredicted RBP34.69■■■■□ 3.14
CYB561-204ENST00000448884 MROH2BQ7Z745 1585 aa34.63■■■■□ 3.13
CYB561-204ENST00000448884 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
CYB561-204ENST00000448884 WIZO95785 1651 aa34.35■■■■□ 3.09
CYB561-204ENST00000448884 PEG3Q9GZU2 1588 aa34.18■■■■□ 3.06
CYB561-204ENST00000448884 TOP2AP11388 1531 aaKnown RBP34.05■■■■□ 3.04
CYB561-204ENST00000448884 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
CYB561-204ENST00000448884 ATAD2BQ9ULI0 1458 aa33.98■■■■□ 3.03
CYB561-204ENST00000448884 NCAPD3P42695 1498 aa33.92■■■■□ 3.02
CYB561-204ENST00000448884 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
CYB561-204ENST00000448884 BAZ1BQ9UIG0 1483 aaKnown RBP33.79■■■■□ 3
CYB561-204ENST00000448884 HMGXB3Q12766 1538 aa33.72■■■□□ 2.99
CYB561-204ENST00000448884 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
CYB561-204ENST00000448884 CUX2O14529 1486 aa33.62■■■□□ 2.97
CYB561-204ENST00000448884 ERCC6Q03468 1493 aa33.59■■■□□ 2.97
CYB561-204ENST00000448884 NESP48681 1621 aa33.46■■■□□ 2.95
CYB561-204ENST00000448884 CHIC1Q5VXU3 224 aa33.38■■■□□ 2.93
CYB561-204ENST00000448884 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
CYB561-204ENST00000448884 THOC2Q8NI27 1593 aaKnown RBP33.13■■■□□ 2.89
CYB561-204ENST00000448884 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
CYB561-204ENST00000448884 CFTRP13569 1480 aa32.94■■■□□ 2.86
CYB561-204ENST00000448884 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
CYB561-204ENST00000448884 PRDM2Q13029 1718 aa32.88■■■□□ 2.85
CYB561-204ENST00000448884 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
CYB561-204ENST00000448884 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
CYB561-204ENST00000448884 ABCC8Q09428 1581 aa32.85■■■□□ 2.85
CYB561-204ENST00000448884 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.839e-6■■■■■ 50.1
CYB561-204ENST00000448884 MRC2Q9UBG0 1479 aa32.69■■■□□ 2.82
CYB561-204ENST00000448884 WDR62O43379 1518 aa32.63■■■□□ 2.81
CYB561-204ENST00000448884 SYNJ1O43426 1573 aa32.57■■■□□ 2.81
CYB561-204ENST00000448884 CEP164Q9UPV0 1460 aa32.52■■■□□ 2.8
CYB561-204ENST00000448884 TOP2BQ02880 1626 aa32.5■■■□□ 2.79
CYB561-204ENST00000448884 BIVM-ERCC5R4GMW8 1640 aa32.49■■■□□ 2.79
CYB561-204ENST00000448884 FANCD2Q9BXW9 1451 aa32.49■■■□□ 2.79
CYB561-204ENST00000448884 CUX1P39880 1505 aa32.41■■■□□ 2.78
CYB561-204ENST00000448884 URB2Q14146 1524 aaKnown RBP32.26■■■□□ 2.76
CYB561-204ENST00000448884 EEA1Q15075 1411 aa32.22■■■□□ 2.75
CYB561-204ENST00000448884 DNMBPQ6XZF7 1577 aa32.21■■■□□ 2.75
CYB561-204ENST00000448884 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
CYB561-204ENST00000448884 SOGA1O94964 1423 aa32.19■■■□□ 2.74
CYB561-204ENST00000448884 TOPBP1Q92547 1522 aa32.12■■■□□ 2.73
CYB561-204ENST00000448884 FGD5Q6ZNL6 1462 aa32.07■■■□□ 2.72
CYB561-204ENST00000448884 RUSC2Q8N2Y8 1516 aa32.07■■■□□ 2.72
CYB561-204ENST00000448884 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
CYB561-204ENST00000448884 LOC105371045A0A1W2PR82 267 aa32.03■■■□□ 2.72
CYB561-204ENST00000448884 CSRNP3Q8WYN3 585 aa31.96■■■□□ 2.71
CYB561-204ENST00000448884 POLA1P09884 1462 aaPredicted RBP31.94■■■□□ 2.7
CYB561-204ENST00000448884 KIF27Q86VH2 1401 aa31.9■■■□□ 2.7
CYB561-204ENST00000448884 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
CYB561-204ENST00000448884 IFT140Q96RY7 1462 aa31.87■■■□□ 2.69
CYB561-204ENST00000448884 ABCA10Q8WWZ4 1543 aa31.82■■■□□ 2.68
CYB561-204ENST00000448884 KIF21BO75037 1637 aa31.81■■■□□ 2.68
CYB561-204ENST00000448884 RAD54L2Q9Y4B4 1467 aa31.79■■■□□ 2.68
CYB561-204ENST00000448884 WDR97A6NE52 1622 aa31.77■■■□□ 2.68
CYB561-204ENST00000448884 GOLGA3Q08378 1498 aa31.73■■■□□ 2.67
CYB561-204ENST00000448884 RIMBP3CA6NJZ7 1639 aa31.69■■■□□ 2.66
CYB561-204ENST00000448884 RIMBP3BA6NNM3 1639 aa31.69■■■□□ 2.66
CYB561-204ENST00000448884 RIMBP3Q9UFD9 1639 aa31.69■■■□□ 2.66
CYB561-204ENST00000448884 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
CYB561-204ENST00000448884 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
CYB561-204ENST00000448884 EHMT2Q96KQ7 1210 aa31.67■■■□□ 2.66
CYB561-204ENST00000448884 PRXQ9BXM0 1461 aa31.65■■■□□ 2.66
CYB561-204ENST00000448884 ERICH3Q5RHP9 1530 aa31.63■■■□□ 2.65
CYB561-204ENST00000448884 ABCA5Q8WWZ7 1642 aa31.59■■■□□ 2.65
CYB561-204ENST00000448884 IGF1RP08069 1367 aa31.59■■■□□ 2.65
CYB561-204ENST00000448884 TNIKQ9UKE5 1360 aa31.59■■■□□ 2.65
CYB561-204ENST00000448884 AQRO60306 1485 aaKnown RBP eCLIP31.58■■■□□ 2.653e-7■■■■■ 51.1
CYB561-204ENST00000448884 RAPGEF2Q9Y4G8 1499 aa31.57■■■□□ 2.64
CYB561-204ENST00000448884 ARHGEF11O15085 1522 aa31.57■■■□□ 2.64
CYB561-204ENST00000448884 UBTFP17480 764 aaKnown RBP31.5■■■□□ 2.63
CYB561-204ENST00000448884 GAPVD1Q14C86 1478 aa31.49■■■□□ 2.63
CYB561-204ENST00000448884 CHD1O14646 1710 aa31.47■■■□□ 2.63
CYB561-204ENST00000448884 CUL7Q14999 1698 aa31.47■■■□□ 2.63
CYB561-204ENST00000448884 TDRD9Q8NDG6 1382 aaKnown RBP31.47■■■□□ 2.63
CYB561-204ENST00000448884 CARMIL1Q5VZK9 1371 aa31.44■■■□□ 2.62
CYB561-204ENST00000448884 PBRM1Q86U86 1689 aa31.39■■■□□ 2.61
CYB561-204ENST00000448884 CEP162Q5TB80 1403 aa31.38■■■□□ 2.61
CYB561-204ENST00000448884 FBLN2P98095 1184 aa31.33■■■□□ 2.61
CYB561-204ENST00000448884 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.6
CYB561-204ENST00000448884 GRIN2BQ13224 1484 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms