Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDC42P60953 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 DUSP5P2-201ENST00000426873 1033 ntBASIC17.03■□□□□ 0.32
CDC42P60953 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42P60953 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.03■□□□□ 0.32
CDC42P60953 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42P60953 AC112777.1-201ENST00000540175 1423 ntBASIC17.03■□□□□ 0.32
CDC42P60953 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42P60953 AC138028.4-201ENST00000564984 1845 ntBASIC17.03■□□□□ 0.32
CDC42P60953 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.03■□□□□ 0.32
CDC42P60953 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CDC42P60953 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC42P60953 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDC42P60953 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC42P60953 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CDC42P60953 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC42P60953 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC42P60953 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC42P60953 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.02■□□□□ 0.32
CDC42P60953 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42P60953 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDC42P60953 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC42P60953 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDC42P60953 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC42P60953 PRORSD1P-202ENST00000563365 2154 ntBASIC17.02■□□□□ 0.31
CDC42P60953 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.02■□□□□ 0.31
CDC42P60953 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC42P60953 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC42P60953 AC092368.3-202ENST00000574180 1591 ntBASIC17.02■□□□□ 0.31
CDC42P60953 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC42P60953 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
CDC42P60953 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC42P60953 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDC42P60953 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDC42P60953 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC42P60953 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC42P60953 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC42P60953 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC42P60953 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC42P60953 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42P60953 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC42P60953 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC42P60953 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.01■□□□□ 0.31
CDC42P60953 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms