Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 TUBB8P6-201ENST00000436895 1288 ntBASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNF1Q9H3M0 AL118508.1-201ENST00000613502 2345 ntBASIC20.33■□□□□ 0.84
KCNF1Q9H3M0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KCNF1Q9H3M0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KCNF1Q9H3M0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KCNF1Q9H3M0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
KCNF1Q9H3M0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.33■□□□□ 0.84
KCNF1Q9H3M0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 LSM12P1-201ENST00000411836 588 ntBASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 AL096828.2-201ENST00000567259 1965 ntBASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNF1Q9H3M0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 LINC00602-201ENST00000629776 2065 ntBASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 KRT8P32-201ENST00000512863 1461 ntBASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 AL512625.2-201ENST00000417533 625 ntBASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNF1Q9H3M0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 AC137761.2-201ENST00000561729 223 ntBASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 AC145350.3-201ENST00000569033 163 ntBASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 MYC-208ENST00000641036 567 ntBASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNF1Q9H3M0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNF1Q9H3M0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNF1Q9H3M0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNF1Q9H3M0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNF1Q9H3M0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNF1Q9H3M0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms