Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC37.69■■■■□ 3.62
KCNF1Q9H3M0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC37.02■■■■□ 3.52
KCNF1Q9H3M0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
KCNF1Q9H3M0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC36.47■■■■□ 3.43
KCNF1Q9H3M0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
KCNF1Q9H3M0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
KCNF1Q9H3M0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.9■■■■□ 3.34
KCNF1Q9H3M0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.63■■■■□ 3.29
KCNF1Q9H3M0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.56■■■■□ 3.28
KCNF1Q9H3M0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.49■■■■□ 3.27
KCNF1Q9H3M0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC35.44■■■■□ 3.26
KCNF1Q9H3M0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.44■■■■□ 3.26
KCNF1Q9H3M0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.43■■■■□ 3.26
KCNF1Q9H3M0 AL356512.1-201ENST00000607453 1739 ntBASIC35.43■■■■□ 3.26
KCNF1Q9H3M0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
KCNF1Q9H3M0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC35.22■■■■□ 3.23
KCNF1Q9H3M0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.04■■■■□ 3.2
KCNF1Q9H3M0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC35.02■■■■□ 3.2
KCNF1Q9H3M0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.96■■■■□ 3.19
KCNF1Q9H3M0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
KCNF1Q9H3M0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
KCNF1Q9H3M0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.27■■■■□ 3.08
KCNF1Q9H3M0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.08
KCNF1Q9H3M0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
KCNF1Q9H3M0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC34.16■■■■□ 3.06
KCNF1Q9H3M0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
KCNF1Q9H3M0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
KCNF1Q9H3M0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
KCNF1Q9H3M0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC34.03■■■■□ 3.04
KCNF1Q9H3M0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.98■■■■□ 3.03
KCNF1Q9H3M0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.91■■■■□ 3.02
KCNF1Q9H3M0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
KCNF1Q9H3M0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.83■■■■□ 3.01
KCNF1Q9H3M0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
KCNF1Q9H3M0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
KCNF1Q9H3M0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
KCNF1Q9H3M0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.62■■■□□ 2.97
KCNF1Q9H3M0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
KCNF1Q9H3M0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
KCNF1Q9H3M0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.49■■■□□ 2.95
KCNF1Q9H3M0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
KCNF1Q9H3M0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC33.29■■■□□ 2.92
KCNF1Q9H3M0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
KCNF1Q9H3M0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.25■■■□□ 2.91
KCNF1Q9H3M0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
KCNF1Q9H3M0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
KCNF1Q9H3M0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
KCNF1Q9H3M0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
KCNF1Q9H3M0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
KCNF1Q9H3M0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.08■■■□□ 2.89
KCNF1Q9H3M0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
KCNF1Q9H3M0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.98■■■□□ 2.87
KCNF1Q9H3M0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
KCNF1Q9H3M0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
KCNF1Q9H3M0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.91■■■□□ 2.86
KCNF1Q9H3M0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.9■■■□□ 2.86
KCNF1Q9H3M0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
KCNF1Q9H3M0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
KCNF1Q9H3M0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.8■■■□□ 2.84
KCNF1Q9H3M0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
KCNF1Q9H3M0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
KCNF1Q9H3M0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
KCNF1Q9H3M0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
KCNF1Q9H3M0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.74■■■□□ 2.83
KCNF1Q9H3M0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
KCNF1Q9H3M0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.65■■■□□ 2.82
KCNF1Q9H3M0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
KCNF1Q9H3M0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.62■■■□□ 2.81
KCNF1Q9H3M0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.62■■■□□ 2.81
KCNF1Q9H3M0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
KCNF1Q9H3M0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
KCNF1Q9H3M0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.55■■■□□ 2.8
KCNF1Q9H3M0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.53■■■□□ 2.8
KCNF1Q9H3M0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
KCNF1Q9H3M0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.49■■■□□ 2.79
KCNF1Q9H3M0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.47■■■□□ 2.79
KCNF1Q9H3M0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
KCNF1Q9H3M0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
KCNF1Q9H3M0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
KCNF1Q9H3M0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
KCNF1Q9H3M0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.42■■■□□ 2.78
KCNF1Q9H3M0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
KCNF1Q9H3M0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.4■■■□□ 2.78
KCNF1Q9H3M0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
KCNF1Q9H3M0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
KCNF1Q9H3M0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.36■■■□□ 2.77
KCNF1Q9H3M0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
KCNF1Q9H3M0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
KCNF1Q9H3M0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
KCNF1Q9H3M0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNF1Q9H3M0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
KCNF1Q9H3M0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
KCNF1Q9H3M0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
KCNF1Q9H3M0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.23■■■□□ 2.75
KCNF1Q9H3M0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.16■■■□□ 2.74
KCNF1Q9H3M0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
KCNF1Q9H3M0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.14■■■□□ 2.74
KCNF1Q9H3M0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
KCNF1Q9H3M0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
KCNF1Q9H3M0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms