Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 AC120498.9-201ENST00000339021 3867 ntBASIC16.45■□□□□ 0.22
HIST3H3Q16695 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 AC128688.1-201ENST00000487626 519 ntBASIC16.45■□□□□ 0.22
HIST3H3Q16695 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 AC036111.1-201ENST00000533973 1582 ntBASIC16.45■□□□□ 0.22
HIST3H3Q16695 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.45■□□□□ 0.22
HIST3H3Q16695 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H3Q16695 KRT8P7-201ENST00000533003 1432 ntBASIC16.45■□□□□ 0.22
HIST3H3Q16695 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
HIST3H3Q16695 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HIST3H3Q16695 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 KRT8P50-201ENST00000562022 1438 ntBASIC16.44■□□□□ 0.22
HIST3H3Q16695 BICD1-207ENST00000551848 1962 ntBASIC16.44■□□□□ 0.22
HIST3H3Q16695 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H3Q16695 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HIST3H3Q16695 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H3Q16695 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HIST3H3Q16695 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H3Q16695 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HIST3H3Q16695 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST3H3Q16695 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H3Q16695 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms