Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.3■□□□□ 0.68
PRDM4Q9UKN5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 AC123595.1-201ENST00000440769 1046 ntBASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM4Q9UKN5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 BX119927.1-201ENST00000636596 1552 ntBASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 AC053503.5-201ENST00000601508 636 ntBASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM4Q9UKN5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM4Q9UKN5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRDM4Q9UKN5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRDM4Q9UKN5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRDM4Q9UKN5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM4Q9UKN5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms