Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN6P29350 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN6P29350 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN6P29350 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PTPN6P29350 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN6P29350 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTPN6P29350 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN6P29350 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN6P29350 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN6P29350 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN6P29350 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN6P29350 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN6P29350 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN6P29350 NIFKP9-201ENST00000419265 221 ntBASIC17.78■□□□□ 0.44
PTPN6P29350 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN6P29350 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.78■□□□□ 0.44
PTPN6P29350 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN6P29350 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN6P29350 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN6P29350 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN6P29350 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN6P29350 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN6P29350 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
PTPN6P29350 AC068880.1-201ENST00000507289 2297 ntBASIC17.78■□□□□ 0.44
PTPN6P29350 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN6P29350 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
PTPN6P29350 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 KRT8P32-201ENST00000512863 1461 ntBASIC17.77■□□□□ 0.44
PTPN6P29350 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN6P29350 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN6P29350 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PTPN6P29350 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 TSPY7P-201ENST00000431358 1114 ntBASIC17.77■□□□□ 0.44
PTPN6P29350 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN6P29350 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPN6P29350 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN6P29350 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN6P29350 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN6P29350 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN6P29350 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN6P29350 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN6P29350 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN6P29350 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.77■□□□□ 0.43
PTPN6P29350 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN6P29350 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.77■□□□□ 0.43
PTPN6P29350 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN6P29350 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN6P29350 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 AL162741.1-201ENST00000565563 1558 ntBASIC17.76■□□□□ 0.43
PTPN6P29350 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPN6P29350 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN6P29350 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTPN6P29350 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN6P29350 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN6P29350 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN6P29350 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.76■□□□□ 0.43
PTPN6P29350 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN6P29350 CD177P1-201ENST00000606252 935 ntBASIC17.76■□□□□ 0.43
PTPN6P29350 AL445675.2-201ENST00000620291 557 ntBASIC17.76■□□□□ 0.43
PTPN6P29350 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPN6P29350 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN6P29350 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN6P29350 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN6P29350 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN6P29350 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN6P29350 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN6P29350 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN6P29350 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN6P29350 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PTPN6P29350 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPN6P29350 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms