Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 YBX1P10-201ENST00000444752 975 ntBASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 BID-214ENST00000617586 542 ntTSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 AC073210.2-201ENST00000430369 194 ntBASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
KCNIP3Q9Y2W7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 AC016769.1-201ENST00000409132 1010 ntBASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 AC231657.2-201ENST00000624556 255 ntBASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 AC067852.2-201ENST00000590513 2313 ntBASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP3Q9Y2W7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 AC126763.1-201ENST00000552015 2118 ntBASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms