Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 AC008556.1-201ENST00000610908 2040 ntBASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKAL1Q5VV42 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 AP002982.1-201ENST00000492365 877 ntBASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 AC026271.3-201ENST00000571884 352 ntBASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKAL1Q5VV42 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKAL1Q5VV42 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.52■□□□□ 0.87
CDKAL1Q5VV42 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.52■□□□□ 0.87
CDKAL1Q5VV42 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 KRT18P41-201ENST00000518924 1277 ntBASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 AC011298.2-201ENST00000617989 482 ntBASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 KRT16P1-201ENST00000399124 1418 ntBASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKAL1Q5VV42 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 ESPNP-201ENST00000270691 2015 ntBASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 AC130371.2-201ENST00000619443 611 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms