Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 AL049637.2-201ENST00000641778 930 ntBASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP13A4Q4VNC1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 REXO1L10P-201ENST00000615707 1290 ntBASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 REXO1L12P-201ENST00000622156 912 ntBASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 RCC2P3-201ENST00000418112 1537 ntBASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP13A4Q4VNC1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 AC018470.1-201ENST00000624790 3129 ntBASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 BICD1-207ENST00000551848 1962 ntBASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 AC012618.2-201ENST00000428058 849 ntBASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 SLC25A1P4-201ENST00000567977 778 ntBASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP13A4Q4VNC1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP13A4Q4VNC1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms