Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 AL031598.1-201ENST00000561511 1773 ntBASIC17.55■□□□□ 0.4
AP3D1O14617 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
AP3D1O14617 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
AP3D1O14617 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
AP3D1O14617 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AP3D1O14617 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
AP3D1O14617 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AP3D1O14617 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
AP3D1O14617 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3D1O14617 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3D1O14617 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
AP3D1O14617 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.54■□□□□ 0.4
AP3D1O14617 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 AP000997.3-201ENST00000623333 2250 ntBASIC17.54■□□□□ 0.4
AP3D1O14617 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.54■□□□□ 0.4
AP3D1O14617 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
AP3D1O14617 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AP3D1O14617 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
AP3D1O14617 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.54■□□□□ 0.4
AP3D1O14617 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3D1O14617 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3D1O14617 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
AP3D1O14617 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3D1O14617 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
AP3D1O14617 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
AP3D1O14617 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
AP3D1O14617 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 KRT18P29-201ENST00000397031 1267 ntBASIC17.53■□□□□ 0.4
AP3D1O14617 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
AP3D1O14617 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.53■□□□□ 0.4
AP3D1O14617 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.53■□□□□ 0.4
AP3D1O14617 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
AP3D1O14617 ITM2C-210ENST00000620962 501 ntBASIC17.53■□□□□ 0.4
AP3D1O14617 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.53■□□□□ 0.4
AP3D1O14617 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.53■□□□□ 0.4
AP3D1O14617 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
AP3D1O14617 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.53■□□□□ 0.4
AP3D1O14617 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3D1O14617 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
AP3D1O14617 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3D1O14617 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3D1O14617 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3D1O14617 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3D1O14617 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP3D1O14617 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3D1O14617 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3D1O14617 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.52■□□□□ 0.4
AP3D1O14617 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.52■□□□□ 0.4
AP3D1O14617 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.52■□□□□ 0.4
AP3D1O14617 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3D1O14617 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3D1O14617 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.52■□□□□ 0.4
AP3D1O14617 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP3D1O14617 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3D1O14617 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
AP3D1O14617 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.52■□□□□ 0.39
AP3D1O14617 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP3D1O14617 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.52■□□□□ 0.39
AP3D1O14617 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP3D1O14617 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3D1O14617 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3D1O14617 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP3D1O14617 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.52■□□□□ 0.39
AP3D1O14617 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
AP3D1O14617 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP3D1O14617 AL512353.2-201ENST00000448759 1962 ntBASIC17.51■□□□□ 0.39
AP3D1O14617 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3D1O14617 HTR7P1-201ENST00000538670 1336 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms