Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SIK3-203ENST00000415541 3816 ntTSL 1 (best)7.72□□□□□ -1.171e-6■■■■■ 43.7
XRN2Q9H0D6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.746e-9■■■■■ 43.7
XRN2Q9H0D6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.856e-9■■■■■ 43.7
XRN2Q9H0D6 PLEKHA7-209ENST00000529213 561 ntTSL 413.65□□□□□ -0.224e-34■■■■■ 43.6
XRN2Q9H0D6 SLC4A7-204ENST00000428005 1572 ntTSL 1 (best)25.5■■□□□ 1.672e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-208ENST00000437266 3407 ntTSL 1 (best)15.1■□□□□ 0.012e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.82□□□□□ -0.22e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.212e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.68□□□□□ -0.222e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.242e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.262e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-209ENST00000438530 3825 ntTSL 1 (best)13.31□□□□□ -0.282e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.08□□□□□ -0.322e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-215ENST00000457377 3600 ntTSL 1 (best)12.69□□□□□ -0.382e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.54□□□□□ -0.42e-7■■■■■ 43.5
XRN2Q9H0D6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.91■■■□□ 2.542e-14■■■■■ 43.3
XRN2Q9H0D6 CCND3-221ENST00000514588 490 ntTSL 429.27■■■□□ 2.281e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.36■■■□□ 2.131e-7■■■■■ 43.3
XRN2Q9H0D6 VPS37C-202ENST00000535818 865 ntTSL 225.94■■□□□ 1.741e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.72■■□□□ 1.711e-7■■■■■ 43.3
XRN2Q9H0D6 JRK-208ENST00000591357 571 ntTSL 425.24■■□□□ 1.631e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF316-203ENST00000614588 939 ntTSL 325.11■■□□□ 1.612e-14■■■■■ 43.3
XRN2Q9H0D6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.51e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-202ENST00000359107 954 ntTSL 324.38■■□□□ 1.494e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-211ENST00000550973 1111 ntTSL 524.25■■□□□ 1.478e-8■■■■■ 43.3
XRN2Q9H0D6 ZNF395-203ENST00000517459 224 ntTSL 224.14■■□□□ 1.451e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM11-202ENST00000526442 762 ntTSL 323.93■■□□□ 1.421e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.59■■□□□ 1.371e-7■■■■■ 43.3
XRN2Q9H0D6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.36■■□□□ 1.331e-7■■■■■ 43.3
XRN2Q9H0D6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.09■■□□□ 1.291e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC130-209ENST00000588809 694 ntTSL 322.95■■□□□ 1.261e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.251e-7■■■■■ 43.3
XRN2Q9H0D6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.251e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.75■■□□□ 1.231e-7■■■■■ 43.3
XRN2Q9H0D6 RAB35-204ENST00000540803 551 ntTSL 222.7■■□□□ 1.221e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC130-210ENST00000589096 720 nt22.6■■□□□ 1.211e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF395-207ENST00000521185 584 ntTSL 422.32■■□□□ 1.161e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.141e-7■■■■■ 43.3
XRN2Q9H0D6 CPLX1-202ENST00000504062 497 ntTSL 322.1■■□□□ 1.131e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-208ENST00000505672 932 ntTSL 221.87■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-209ENST00000505884 592 ntTSL 421.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-211ENST00000508143 574 ntTSL 421.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-214ENST00000511161 579 ntTSL 421.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-219ENST00000513956 562 ntTSL 221.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC12-212ENST00000605358 402 ntTSL 521.79■■□□□ 1.081e-7■■■■■ 43.3
XRN2Q9H0D6 FAM83E-202ENST00000593772 565 ntTSL 321.52■■□□□ 1.041e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-217ENST00000512381 432 ntTSL 321.28■■□□□ 11e-7■■■■■ 43.3
XRN2Q9H0D6 RAB35-206ENST00000544304 2449 ntTSL 221.23■□□□□ 0.991e-7■■■■■ 43.3
XRN2Q9H0D6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.971e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF395-205ENST00000520290 703 ntTSL 521.09■□□□□ 0.971e-7■■■■■ 43.3
XRN2Q9H0D6 DENND4A-208ENST00000568515 2655 ntTSL 220.94■□□□□ 0.941e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-201ENST00000084795 612 ntTSL 1 (best)20.9■□□□□ 0.941e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.9■□□□□ 0.948e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.948e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.9■□□□□ 0.948e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-207ENST00000549533 666 ntTSL 220.9■□□□□ 0.941e-7■■■■■ 43.3
XRN2Q9H0D6 GLCE-204ENST00000559798 1308 ntTSL 1 (best)20.77■□□□□ 0.911e-7■■■■■ 43.3
XRN2Q9H0D6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.62■□□□□ 0.891e-7■■■■■ 43.3
XRN2Q9H0D6 SH3TC1-211ENST00000507123 554 ntTSL 1 (best)20.3■□□□□ 0.841e-6■■■■■ 43.3
XRN2Q9H0D6 CCDC130-206ENST00000587019 756 ntTSL 320.28■□□□□ 0.841e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-213ENST00000552347 1645 ntTSL 520.22■□□□□ 0.838e-8■■■■■ 43.3
XRN2Q9H0D6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.05■□□□□ 0.81e-6■■■■■ 43.3
XRN2Q9H0D6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.89■□□□□ 0.771e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC130-203ENST00000585844 887 ntTSL 319.88■□□□□ 0.771e-7■■■■■ 43.3
XRN2Q9H0D6 FAM83E-203ENST00000595110 590 ntTSL 419.75■□□□□ 0.751e-7■■■■■ 43.3
XRN2Q9H0D6 FAM83E-204ENST00000599126 477 ntTSL 519.66■□□□□ 0.741e-7■■■■■ 43.3
XRN2Q9H0D6 JRK-201ENST00000503272 587 ntTSL 419.57■□□□□ 0.721e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.44■□□□□ 0.71e-7■■■■■ 43.3
XRN2Q9H0D6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.661e-7■■■■■ 43.3
XRN2Q9H0D6 MAP2K7-206ENST00000475022 1519 ntTSL 1 (best)19.1■□□□□ 0.651e-7■■■■■ 43.3
XRN2Q9H0D6 CPLX1-204ENST00000506404 569 ntTSL 219.08■□□□□ 0.641e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-204ENST00000423607 2007 ntTSL 219.07■□□□□ 0.644e-8■■■■■ 43.3
XRN2Q9H0D6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.631e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-206ENST00000549370 628 ntTSL 518.94■□□□□ 0.628e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-202ENST00000546623 541 ntTSL 518.83■□□□□ 0.61e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.61e-7■■■■■ 43.3
XRN2Q9H0D6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.61■□□□□ 0.571e-7■■■■■ 43.3
XRN2Q9H0D6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.45■□□□□ 0.541e-7■■■■■ 43.3
XRN2Q9H0D6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.541e-7■■■■■ 43.3
XRN2Q9H0D6 SH3TC1-209ENST00000504822 259 ntTSL 418.43■□□□□ 0.541e-6■■■■■ 43.3
XRN2Q9H0D6 CCND3-206ENST00000502771 544 ntTSL 418.39■□□□□ 0.531e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.511e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.03■□□□□ 0.481e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-216ENST00000511686 576 ntTSL 318.02■□□□□ 0.481e-7■■■■■ 43.3
XRN2Q9H0D6 TBCD-225ENST00000576996 827 ntTSL 517.73■□□□□ 0.431e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.424e-8■■■■■ 43.3
XRN2Q9H0D6 RAB35-203ENST00000538903 643 ntTSL 317.64■□□□□ 0.411e-7■■■■■ 43.3
XRN2Q9H0D6 DENND4A-206ENST00000564674 3389 ntTSL 1 (best)17.58■□□□□ 0.41e-7■■■■■ 43.3
XRN2Q9H0D6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.41e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-212ENST00000551749 2091 ntTSL 217.56■□□□□ 0.48e-8■■■■■ 43.3
XRN2Q9H0D6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.381e-7■■■■■ 43.3
XRN2Q9H0D6 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.98■□□□□ 0.311e-10■■■■■ 43.3
XRN2Q9H0D6 PUF60-220ENST00000532884 819 ntTSL 516.98■□□□□ 0.311e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-202ENST00000395463 1445 ntTSL 1 (best)16.69■□□□□ 0.261e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-220ENST00000514382 476 ntTSL 416.59■□□□□ 0.251e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.55■□□□□ 0.241e-7■■■■■ 43.3
XRN2Q9H0D6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.241e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-208ENST00000461101 2363 ntTSL 1 (best)16.52■□□□□ 0.244e-8■■■■■ 43.3
XRN2Q9H0D6 FBXL19-203ENST00000427128 3312 ntTSL 1 (best)16.11■□□□□ 0.171e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.161e-7■■■■■ 43.3
Retrieved 100 of 21,068 protein–RNA pairs in 563.1 ms