Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SIK3-203ENST00000415541 3816 ntTSL 1 (best)7.72□□□□□ -1.171e-6■■■■■ 43.7
XRN2Q9H0D6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.746e-9■■■■■ 43.7
XRN2Q9H0D6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.856e-9■■■■■ 43.7
XRN2Q9H0D6 PLEKHA7-209ENST00000529213 561 ntTSL 413.65□□□□□ -0.224e-34■■■■■ 43.6
XRN2Q9H0D6 SLC4A7-204ENST00000428005 1572 ntTSL 1 (best)25.5■■□□□ 1.672e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-208ENST00000437266 3407 ntTSL 1 (best)15.1■□□□□ 0.012e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.82□□□□□ -0.22e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.212e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.68□□□□□ -0.222e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.242e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.262e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-209ENST00000438530 3825 ntTSL 1 (best)13.31□□□□□ -0.282e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.08□□□□□ -0.322e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-215ENST00000457377 3600 ntTSL 1 (best)12.69□□□□□ -0.382e-7■■■■■ 43.5
XRN2Q9H0D6 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.54□□□□□ -0.42e-7■■■■■ 43.5
XRN2Q9H0D6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.91■■■□□ 2.542e-14■■■■■ 43.3
XRN2Q9H0D6 CCND3-221ENST00000514588 490 ntTSL 429.27■■■□□ 2.281e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.36■■■□□ 2.131e-7■■■■■ 43.3
XRN2Q9H0D6 VPS37C-202ENST00000535818 865 ntTSL 225.94■■□□□ 1.741e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.72■■□□□ 1.711e-7■■■■■ 43.3
XRN2Q9H0D6 JRK-208ENST00000591357 571 ntTSL 425.24■■□□□ 1.631e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF316-203ENST00000614588 939 ntTSL 325.11■■□□□ 1.612e-14■■■■■ 43.3
XRN2Q9H0D6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.51e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-202ENST00000359107 954 ntTSL 324.38■■□□□ 1.494e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-211ENST00000550973 1111 ntTSL 524.25■■□□□ 1.478e-8■■■■■ 43.3
XRN2Q9H0D6 ZNF395-203ENST00000517459 224 ntTSL 224.14■■□□□ 1.451e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM11-202ENST00000526442 762 ntTSL 323.93■■□□□ 1.421e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.59■■□□□ 1.371e-7■■■■■ 43.3
XRN2Q9H0D6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.36■■□□□ 1.331e-7■■■■■ 43.3
XRN2Q9H0D6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.09■■□□□ 1.291e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC130-209ENST00000588809 694 ntTSL 322.95■■□□□ 1.261e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.251e-7■■■■■ 43.3
XRN2Q9H0D6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.251e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.75■■□□□ 1.231e-7■■■■■ 43.3
XRN2Q9H0D6 RAB35-204ENST00000540803 551 ntTSL 222.7■■□□□ 1.221e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC130-210ENST00000589096 720 nt22.6■■□□□ 1.211e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF395-207ENST00000521185 584 ntTSL 422.32■■□□□ 1.161e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.141e-7■■■■■ 43.3
XRN2Q9H0D6 CPLX1-202ENST00000504062 497 ntTSL 322.1■■□□□ 1.131e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-208ENST00000505672 932 ntTSL 221.87■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-209ENST00000505884 592 ntTSL 421.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-211ENST00000508143 574 ntTSL 421.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-214ENST00000511161 579 ntTSL 421.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-219ENST00000513956 562 ntTSL 221.85■■□□□ 1.091e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC12-212ENST00000605358 402 ntTSL 521.79■■□□□ 1.081e-7■■■■■ 43.3
XRN2Q9H0D6 FAM83E-202ENST00000593772 565 ntTSL 321.52■■□□□ 1.041e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-217ENST00000512381 432 ntTSL 321.28■■□□□ 11e-7■■■■■ 43.3
XRN2Q9H0D6 RAB35-206ENST00000544304 2449 ntTSL 221.23■□□□□ 0.991e-7■■■■■ 43.3
XRN2Q9H0D6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.971e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF395-205ENST00000520290 703 ntTSL 521.09■□□□□ 0.971e-7■■■■■ 43.3
XRN2Q9H0D6 DENND4A-208ENST00000568515 2655 ntTSL 220.94■□□□□ 0.941e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-201ENST00000084795 612 ntTSL 1 (best)20.9■□□□□ 0.941e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.9■□□□□ 0.948e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.948e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.9■□□□□ 0.948e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-207ENST00000549533 666 ntTSL 220.9■□□□□ 0.941e-7■■■■■ 43.3
XRN2Q9H0D6 GLCE-204ENST00000559798 1308 ntTSL 1 (best)20.77■□□□□ 0.911e-7■■■■■ 43.3
XRN2Q9H0D6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.62■□□□□ 0.891e-7■■■■■ 43.3
XRN2Q9H0D6 SH3TC1-211ENST00000507123 554 ntTSL 1 (best)20.3■□□□□ 0.841e-6■■■■■ 43.3
XRN2Q9H0D6 CCDC130-206ENST00000587019 756 ntTSL 320.28■□□□□ 0.841e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-213ENST00000552347 1645 ntTSL 520.22■□□□□ 0.838e-8■■■■■ 43.3
XRN2Q9H0D6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.05■□□□□ 0.81e-6■■■■■ 43.3
XRN2Q9H0D6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.89■□□□□ 0.771e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC130-203ENST00000585844 887 ntTSL 319.88■□□□□ 0.771e-7■■■■■ 43.3
XRN2Q9H0D6 FAM83E-203ENST00000595110 590 ntTSL 419.75■□□□□ 0.751e-7■■■■■ 43.3
XRN2Q9H0D6 FAM83E-204ENST00000599126 477 ntTSL 519.66■□□□□ 0.741e-7■■■■■ 43.3
XRN2Q9H0D6 JRK-201ENST00000503272 587 ntTSL 419.57■□□□□ 0.721e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.44■□□□□ 0.71e-7■■■■■ 43.3
XRN2Q9H0D6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.661e-7■■■■■ 43.3
XRN2Q9H0D6 MAP2K7-206ENST00000475022 1519 ntTSL 1 (best)19.1■□□□□ 0.651e-7■■■■■ 43.3
XRN2Q9H0D6 CPLX1-204ENST00000506404 569 ntTSL 219.08■□□□□ 0.641e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-204ENST00000423607 2007 ntTSL 219.07■□□□□ 0.644e-8■■■■■ 43.3
XRN2Q9H0D6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.631e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-206ENST00000549370 628 ntTSL 518.94■□□□□ 0.628e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-202ENST00000546623 541 ntTSL 518.83■□□□□ 0.61e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.61e-7■■■■■ 43.3
XRN2Q9H0D6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.61■□□□□ 0.571e-7■■■■■ 43.3
XRN2Q9H0D6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.45■□□□□ 0.541e-7■■■■■ 43.3
XRN2Q9H0D6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.541e-7■■■■■ 43.3
XRN2Q9H0D6 SH3TC1-209ENST00000504822 259 ntTSL 418.43■□□□□ 0.541e-6■■■■■ 43.3
XRN2Q9H0D6 CCND3-206ENST00000502771 544 ntTSL 418.39■□□□□ 0.531e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.511e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.03■□□□□ 0.481e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-216ENST00000511686 576 ntTSL 318.02■□□□□ 0.481e-7■■■■■ 43.3
XRN2Q9H0D6 TBCD-225ENST00000576996 827 ntTSL 517.73■□□□□ 0.431e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.424e-8■■■■■ 43.3
XRN2Q9H0D6 RAB35-203ENST00000538903 643 ntTSL 317.64■□□□□ 0.411e-7■■■■■ 43.3
XRN2Q9H0D6 DENND4A-206ENST00000564674 3389 ntTSL 1 (best)17.58■□□□□ 0.41e-7■■■■■ 43.3
XRN2Q9H0D6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.41e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-212ENST00000551749 2091 ntTSL 217.56■□□□□ 0.48e-8■■■■■ 43.3
XRN2Q9H0D6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.381e-7■■■■■ 43.3
XRN2Q9H0D6 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.98■□□□□ 0.311e-10■■■■■ 43.3
XRN2Q9H0D6 PUF60-220ENST00000532884 819 ntTSL 516.98■□□□□ 0.311e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-202ENST00000395463 1445 ntTSL 1 (best)16.69■□□□□ 0.261e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-220ENST00000514382 476 ntTSL 416.59■□□□□ 0.251e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.55■□□□□ 0.241e-7■■■■■ 43.3
XRN2Q9H0D6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.241e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-208ENST00000461101 2363 ntTSL 1 (best)16.52■□□□□ 0.244e-8■■■■■ 43.3
XRN2Q9H0D6 FBXL19-203ENST00000427128 3312 ntTSL 1 (best)16.11■□□□□ 0.171e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.161e-7■■■■■ 43.3
Retrieved 100 of 21,068 protein–RNA pairs in 383.8 ms