RNA–Protein interactions for RNA: ENST00000512381.1

CCND3-217, Transcript of cyclin D3, humanhuman

TSL 3

Gene CCND3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-217ENST00000512381 NISCHQ9Y2I1 1504 aa43.75■■■■■ 4.59
CCND3-217ENST00000512381 CCDC180Q9P1Z9 1646 aa39.05■■■■□ 3.84
CCND3-217ENST00000512381 ABCC9O60706 1549 aa38.94■■■■□ 3.82
CCND3-217ENST00000512381 RB1CC1Q8TDY2 1594 aa37.12■■■■□ 3.53
CCND3-217ENST00000512381 DCAF8L2P0C7V8 631 aa37.03■■■■□ 3.52
CCND3-217ENST00000512381 NACADO15069 1562 aa36.91■■■■□ 3.5
CCND3-217ENST00000512381 MYO15BQ96JP2 1530 aa36.45■■■■□ 3.43
CCND3-217ENST00000512381 PABPN1Q86U42 306 aaKnown RBP eCLIP36.37■■■■□ 3.41
CCND3-217ENST00000512381 DNAJC5BQ9UF47 199 aa36.3■■■■□ 3.4
CCND3-217ENST00000512381 ZCCHC6Q5VYS8 1495 aaKnown RBP36.3■■■■□ 3.4
CCND3-217ENST00000512381 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.38
CCND3-217ENST00000512381 DCAF1Q9Y4B6 1507 aa36.1■■■■□ 3.37
CCND3-217ENST00000512381 BICRAQ9NZM4 1560 aa35.99■■■■□ 3.35
CCND3-217ENST00000512381 SCRIBQ14160 1630 aa35.71■■■■□ 3.31
CCND3-217ENST00000512381 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
CCND3-217ENST00000512381 CC2D2AQ9P2K1 1620 aa35.13■■■■□ 3.21
CCND3-217ENST00000512381 EIF4G1Q04637 1599 aaKnown RBP35.12■■■■□ 3.21
CCND3-217ENST00000512381 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
CCND3-217ENST00000512381 NCAPD3P42695 1498 aa34.1■■■■□ 3.05
CCND3-217ENST00000512381 SMARCA4P51532 1647 aa34.05■■■■□ 3.04
CCND3-217ENST00000512381 ATAD2BQ9ULI0 1458 aa34.05■■■■□ 3.04
CCND3-217ENST00000512381 SMARCA2P51531 1590 aa33.95■■■■□ 3.03
CCND3-217ENST00000512381 BAZ1AQ9NRL2 1556 aaPredicted RBP33.94■■■■□ 3.02
CCND3-217ENST00000512381 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
CCND3-217ENST00000512381 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
CCND3-217ENST00000512381 MROH2BQ7Z745 1585 aa33.73■■■□□ 2.99
CCND3-217ENST00000512381 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
CCND3-217ENST00000512381 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
CCND3-217ENST00000512381 NESP48681 1621 aa33.52■■■□□ 2.96
CCND3-217ENST00000512381 CUX2O14529 1486 aa33.38■■■□□ 2.93
CCND3-217ENST00000512381 WIZO95785 1651 aa33.33■■■□□ 2.93
CCND3-217ENST00000512381 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.92
CCND3-217ENST00000512381 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
CCND3-217ENST00000512381 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
CCND3-217ENST00000512381 CADPSQ9ULU8 1353 aa33.12■■■□□ 2.89
CCND3-217ENST00000512381 DNAJC5Q9H3Z4 198 aa33.12■■■□□ 2.89
CCND3-217ENST00000512381 THOC2Q8NI27 1593 aaKnown RBP33.04■■■□□ 2.88
CCND3-217ENST00000512381 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.88
CCND3-217ENST00000512381 TOP2AP11388 1531 aaKnown RBP32.92■■■□□ 2.86
CCND3-217ENST00000512381 MRC2Q9UBG0 1479 aa32.8■■■□□ 2.84
CCND3-217ENST00000512381 CFTRP13569 1480 aa32.77■■■□□ 2.84
CCND3-217ENST00000512381 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
CCND3-217ENST00000512381 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
CCND3-217ENST00000512381 WDR62O43379 1518 aa32.67■■■□□ 2.82
CCND3-217ENST00000512381 CCDC88BA6NC98 1476 aa32.59■■■□□ 2.81
CCND3-217ENST00000512381 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
CCND3-217ENST00000512381 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
CCND3-217ENST00000512381 TOPBP1Q92547 1522 aa32.13■■■□□ 2.73
CCND3-217ENST00000512381 ABCC8Q09428 1581 aa32.07■■■□□ 2.72
CCND3-217ENST00000512381 IFT140Q96RY7 1462 aa32.06■■■□□ 2.72
CCND3-217ENST00000512381 SUPT5HO00267 1087 aaKnown RBP32.04■■■□□ 2.72
CCND3-217ENST00000512381 OSCARQ8IYS5 282 aa32.01■■■□□ 2.71
CCND3-217ENST00000512381 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
CCND3-217ENST00000512381 ZNF608Q9ULD9 1512 aaPredicted RBP32■■■□□ 2.71
CCND3-217ENST00000512381 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
CCND3-217ENST00000512381 POLA1P09884 1462 aaPredicted RBP31.82■■■□□ 2.68
CCND3-217ENST00000512381 EIF4G3O43432 1585 aaKnown RBP31.79■■■□□ 2.68
CCND3-217ENST00000512381 AQRO60306 1485 aaKnown RBP eCLIP31.78■■■□□ 2.68
CCND3-217ENST00000512381 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
CCND3-217ENST00000512381 RAD54L2Q9Y4B4 1467 aa31.74■■■□□ 2.67
CCND3-217ENST00000512381 SOGA1O94964 1423 aa31.73■■■□□ 2.67
CCND3-217ENST00000512381 CUX1P39880 1505 aa31.68■■■□□ 2.66
CCND3-217ENST00000512381 FGD5Q6ZNL6 1462 aa31.67■■■□□ 2.66
CCND3-217ENST00000512381 TDRD9Q8NDG6 1382 aaKnown RBP31.66■■■□□ 2.66
CCND3-217ENST00000512381 FBLN2P98095 1184 aa31.62■■■□□ 2.65
CCND3-217ENST00000512381 CHD1O14646 1710 aa31.49■■■□□ 2.63
CCND3-217ENST00000512381 RIMBP3CA6NJZ7 1639 aa31.46■■■□□ 2.63
CCND3-217ENST00000512381 RIMBP3BA6NNM3 1639 aa31.46■■■□□ 2.63
CCND3-217ENST00000512381 RIMBP3Q9UFD9 1639 aa31.46■■■□□ 2.63
CCND3-217ENST00000512381 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
CCND3-217ENST00000512381 SNAPC4Q5SXM2 1469 aa31.44■■■□□ 2.62
CCND3-217ENST00000512381 ARHGEF11O15085 1522 aa31.42■■■□□ 2.62
CCND3-217ENST00000512381 CHMP7Q8WUX9 453 aaPredicted RBP31.39■■■□□ 2.62
CCND3-217ENST00000512381 GRIN2BQ13224 1484 aa31.39■■■□□ 2.62
CCND3-217ENST00000512381 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
CCND3-217ENST00000512381 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
CCND3-217ENST00000512381 ABCA10Q8WWZ4 1543 aa31.3■■■□□ 2.6
CCND3-217ENST00000512381 WRNQ14191 1432 aaPredicted RBP eCLIP31.29■■■□□ 2.6
CCND3-217ENST00000512381 CYB5RLQ6IPT4 315 aa31.28■■■□□ 2.6
CCND3-217ENST00000512381 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
CCND3-217ENST00000512381 TOP2BQ02880 1626 aa31.21■■■□□ 2.59
CCND3-217ENST00000512381 PBRM1Q86U86 1689 aa31.21■■■□□ 2.59
CCND3-217ENST00000512381 SYNJ1O43426 1573 aa31.21■■■□□ 2.59
CCND3-217ENST00000512381 ABCA5Q8WWZ7 1642 aa31.19■■■□□ 2.58
CCND3-217ENST00000512381 BIVM-ERCC5R4GMW8 1640 aa31.18■■■□□ 2.58
CCND3-217ENST00000512381 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.58
CCND3-217ENST00000512381 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
CCND3-217ENST00000512381 GRIN2AQ12879 1464 aa30.97■■■□□ 2.55
CCND3-217ENST00000512381 ADAMTS12P58397 1594 aa30.96■■■□□ 2.55
CCND3-217ENST00000512381 FHAD1B1AJZ9 1412 aa30.93■■■□□ 2.54
CCND3-217ENST00000512381 ERICH3Q5RHP9 1530 aa30.91■■■□□ 2.54
CCND3-217ENST00000512381 TRHP20396 242 aaPredicted RBP30.88■■■□□ 2.53
CCND3-217ENST00000512381 NUP160Q12769 1436 aa30.84■■■□□ 2.53
CCND3-217ENST00000512381 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
CCND3-217ENST00000512381 ERCC6L2Q5T890 1561 aa30.71■■■□□ 2.51
CCND3-217ENST00000512381 KIF27Q86VH2 1401 aa30.68■■■□□ 2.5
CCND3-217ENST00000512381 IGF1RP08069 1367 aa30.65■■■□□ 2.5
CCND3-217ENST00000512381 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
CCND3-217ENST00000512381 JPH4Q96JJ6 628 aa30.62■■■□□ 2.49
CCND3-217ENST00000512381 PRG4Q92954 1404 aaPredicted RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms