RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
PUF60-220ENST00000532884 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
PUF60-220ENST00000532884 ABCC9O60706 1549 aa30.74■■■□□ 2.51
PUF60-220ENST00000532884 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
PUF60-220ENST00000532884 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
PUF60-220ENST00000532884 NACADO15069 1562 aa29.32■■■□□ 2.28
PUF60-220ENST00000532884 ZCCHC6Q5VYS8 1495 aaKnown RBP29.14■■■□□ 2.26
PUF60-220ENST00000532884 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
PUF60-220ENST00000532884 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
PUF60-220ENST00000532884 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.21e-7■■□□□ 14.1
PUF60-220ENST00000532884 UNC13AQ9UPW8 1703 aa28.67■■■□□ 2.18
PUF60-220ENST00000532884 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
PUF60-220ENST00000532884 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
PUF60-220ENST00000532884 DNAJC5BQ9UF47 199 aa28.4■■■□□ 2.14
PUF60-220ENST00000532884 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
PUF60-220ENST00000532884 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
PUF60-220ENST00000532884 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
PUF60-220ENST00000532884 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
PUF60-220ENST00000532884 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
PUF60-220ENST00000532884 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
PUF60-220ENST00000532884 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
PUF60-220ENST00000532884 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
PUF60-220ENST00000532884 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
PUF60-220ENST00000532884 SMARCA2P51531 1590 aa27.04■■□□□ 1.92
PUF60-220ENST00000532884 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
PUF60-220ENST00000532884 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
PUF60-220ENST00000532884 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
PUF60-220ENST00000532884 WIZO95785 1651 aa26.75■■□□□ 1.87
PUF60-220ENST00000532884 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
PUF60-220ENST00000532884 NESP48681 1621 aa26.56■■□□□ 1.84
PUF60-220ENST00000532884 ERCC6Q03468 1493 aa26.5■■□□□ 1.83
PUF60-220ENST00000532884 TOP2AP11388 1531 aaKnown RBP26.41■■□□□ 1.82
PUF60-220ENST00000532884 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
PUF60-220ENST00000532884 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
PUF60-220ENST00000532884 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
PUF60-220ENST00000532884 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
PUF60-220ENST00000532884 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
PUF60-220ENST00000532884 CUX2O14529 1486 aa26.14■■□□□ 1.78
PUF60-220ENST00000532884 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
PUF60-220ENST00000532884 CFTRP13569 1480 aa26.12■■□□□ 1.77
PUF60-220ENST00000532884 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
PUF60-220ENST00000532884 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
PUF60-220ENST00000532884 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
PUF60-220ENST00000532884 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
PUF60-220ENST00000532884 WDR62O43379 1518 aa25.84■■□□□ 1.73
PUF60-220ENST00000532884 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
PUF60-220ENST00000532884 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
PUF60-220ENST00000532884 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
PUF60-220ENST00000532884 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
PUF60-220ENST00000532884 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
PUF60-220ENST00000532884 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
PUF60-220ENST00000532884 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
PUF60-220ENST00000532884 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
PUF60-220ENST00000532884 CUX1P39880 1505 aa25.37■■□□□ 1.65
PUF60-220ENST00000532884 POLA1P09884 1462 aaPredicted RBP25.37■■□□□ 1.65
PUF60-220ENST00000532884 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
PUF60-220ENST00000532884 SOGA1O94964 1423 aa25.33■■□□□ 1.65
PUF60-220ENST00000532884 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
PUF60-220ENST00000532884 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
PUF60-220ENST00000532884 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.641e-6■■■■□ 21
PUF60-220ENST00000532884 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
PUF60-220ENST00000532884 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
PUF60-220ENST00000532884 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.63
PUF60-220ENST00000532884 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
PUF60-220ENST00000532884 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
PUF60-220ENST00000532884 FBLN2P98095 1184 aa25.11■■□□□ 1.61
PUF60-220ENST00000532884 TOP2BQ02880 1626 aa25.08■■□□□ 1.61
PUF60-220ENST00000532884 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
PUF60-220ENST00000532884 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
PUF60-220ENST00000532884 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
PUF60-220ENST00000532884 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
PUF60-220ENST00000532884 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
PUF60-220ENST00000532884 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
PUF60-220ENST00000532884 CHMP7Q8WUX9 453 aaPredicted RBP24.96■■□□□ 1.59
PUF60-220ENST00000532884 CHD1O14646 1710 aa24.92■■□□□ 1.58
PUF60-220ENST00000532884 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
PUF60-220ENST00000532884 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
PUF60-220ENST00000532884 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
PUF60-220ENST00000532884 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
PUF60-220ENST00000532884 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
PUF60-220ENST00000532884 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
PUF60-220ENST00000532884 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
PUF60-220ENST00000532884 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
PUF60-220ENST00000532884 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
PUF60-220ENST00000532884 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
PUF60-220ENST00000532884 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
PUF60-220ENST00000532884 ADAMTS12P58397 1594 aa24.68■■□□□ 1.54
PUF60-220ENST00000532884 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
PUF60-220ENST00000532884 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
PUF60-220ENST00000532884 CLASP1Q7Z460 1538 aa24.63■■□□□ 1.53
PUF60-220ENST00000532884 IGF1RP08069 1367 aa24.62■■□□□ 1.53
PUF60-220ENST00000532884 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
PUF60-220ENST00000532884 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
PUF60-220ENST00000532884 NUP160Q12769 1436 aa24.52■■□□□ 1.52
PUF60-220ENST00000532884 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
PUF60-220ENST00000532884 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
PUF60-220ENST00000532884 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
PUF60-220ENST00000532884 CUL7Q14999 1698 aa24.44■■□□□ 1.5
PUF60-220ENST00000532884 JPH4Q96JJ6 628 aa24.41■■□□□ 1.5
PUF60-220ENST00000532884 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms