RNA–Protein interactions for RNA: ENST00000437266.5

SLC4A7-208, Transcript of solute carrier family 4 member 7, humanhuman

TSL 1 (best)

Gene SLC4A7, Length 3,407 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7-208ENST00000437266 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
SLC4A7-208ENST00000437266 SHROOM4Q9ULL8 1493 aa27.56■■■□□ 2
SLC4A7-208ENST00000437266 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.94
SLC4A7-208ENST00000437266 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
SLC4A7-208ENST00000437266 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
SLC4A7-208ENST00000437266 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
SLC4A7-208ENST00000437266 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
SLC4A7-208ENST00000437266 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
SLC4A7-208ENST00000437266 LOC105371045A0A1W2PR82 267 aa25.56■■□□□ 1.68
SLC4A7-208ENST00000437266 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
SLC4A7-208ENST00000437266 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
SLC4A7-208ENST00000437266 PPARGC1BQ86YN6 1023 aaKnown RBP25.3■■□□□ 1.64
SLC4A7-208ENST00000437266 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
SLC4A7-208ENST00000437266 HRCP23327 699 aa25.24■■□□□ 1.63
SLC4A7-208ENST00000437266 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
SLC4A7-208ENST00000437266 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
SLC4A7-208ENST00000437266 ABCC9O60706 1549 aa24.77■■□□□ 1.56
SLC4A7-208ENST00000437266 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
SLC4A7-208ENST00000437266 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.54
SLC4A7-208ENST00000437266 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
SLC4A7-208ENST00000437266 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
SLC4A7-208ENST00000437266 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
SLC4A7-208ENST00000437266 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
SLC4A7-208ENST00000437266 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.46
SLC4A7-208ENST00000437266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.14■■□□□ 1.46
SLC4A7-208ENST00000437266 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
SLC4A7-208ENST00000437266 RANGAP1P46060 587 aaPredicted RBP24.03■■□□□ 1.44
SLC4A7-208ENST00000437266 WIZO95785 1651 aa24.02■■□□□ 1.44
SLC4A7-208ENST00000437266 CCER1Q8TC90 406 aaPredicted RBP24.01■■□□□ 1.43
SLC4A7-208ENST00000437266 ZEB1P37275 1124 aaPredicted RBP23.96■■□□□ 1.43
SLC4A7-208ENST00000437266 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
SLC4A7-208ENST00000437266 NACADO15069 1562 aa23.86■■□□□ 1.41
SLC4A7-208ENST00000437266 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
SLC4A7-208ENST00000437266 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
SLC4A7-208ENST00000437266 SOGA1O94964 1423 aa23.64■■□□□ 1.37
SLC4A7-208ENST00000437266 HNRNPUL2Q1KMD3 747 aaKnown RBP23.6■■□□□ 1.37
SLC4A7-208ENST00000437266 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
SLC4A7-208ENST00000437266 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
SLC4A7-208ENST00000437266 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
SLC4A7-208ENST00000437266 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
SLC4A7-208ENST00000437266 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
SLC4A7-208ENST00000437266 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
SLC4A7-208ENST00000437266 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
SLC4A7-208ENST00000437266 APLP2Q06481 763 aa23.36■■□□□ 1.33
SLC4A7-208ENST00000437266 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
SLC4A7-208ENST00000437266 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
SLC4A7-208ENST00000437266 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
SLC4A7-208ENST00000437266 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
SLC4A7-208ENST00000437266 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
SLC4A7-208ENST00000437266 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
SLC4A7-208ENST00000437266 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
SLC4A7-208ENST00000437266 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
SLC4A7-208ENST00000437266 ITGAEP38570 1179 aa23.16■■□□□ 1.3
SLC4A7-208ENST00000437266 ACIN1Q9UKV3 1341 aaKnown RBP23.15■■□□□ 1.3
SLC4A7-208ENST00000437266 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
SLC4A7-208ENST00000437266 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.29
SLC4A7-208ENST00000437266 GOLGA3Q08378 1498 aa23.08■■□□□ 1.28
SLC4A7-208ENST00000437266 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
SLC4A7-208ENST00000437266 CLIP1P30622 1438 aa23.05■■□□□ 1.28
SLC4A7-208ENST00000437266 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
SLC4A7-208ENST00000437266 ATP1B4Q9UN42 357 aaPredicted RBP22.97■■□□□ 1.27
SLC4A7-208ENST00000437266 MIER1Q8N108 512 aa22.96■■□□□ 1.27
SLC4A7-208ENST00000437266 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
SLC4A7-208ENST00000437266 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
SLC4A7-208ENST00000437266 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
SLC4A7-208ENST00000437266 EEA1Q15075 1411 aa22.94■■□□□ 1.26
SLC4A7-208ENST00000437266 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
SLC4A7-208ENST00000437266 CEP164Q9UPV0 1460 aa22.88■■□□□ 1.25
SLC4A7-208ENST00000437266 KANK4Q5T7N3 995 aaPredicted RBP22.85■■□□□ 1.25
SLC4A7-208ENST00000437266 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
SLC4A7-208ENST00000437266 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
SLC4A7-208ENST00000437266 PELP1Q8IZL8 1130 aaKnown RBP22.68■■□□□ 1.22
SLC4A7-208ENST00000437266 FAM50AQ14320 339 aaKnown RBP22.61■■□□□ 1.21
SLC4A7-208ENST00000437266 KIF21BO75037 1637 aa22.59■■□□□ 1.21
SLC4A7-208ENST00000437266 HIRIP3Q9BW71 556 aaPredicted RBP22.52■■□□□ 1.2
SLC4A7-208ENST00000437266 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
SLC4A7-208ENST00000437266 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
SLC4A7-208ENST00000437266 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
SLC4A7-208ENST00000437266 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
SLC4A7-208ENST00000437266 SIN3AQ96ST3 1273 aa22.4■■□□□ 1.18
SLC4A7-208ENST00000437266 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
SLC4A7-208ENST00000437266 CUX1P39880 1505 aa22.39■■□□□ 1.17
SLC4A7-208ENST00000437266 CUX2O14529 1486 aa22.39■■□□□ 1.17
SLC4A7-208ENST00000437266 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
SLC4A7-208ENST00000437266 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
SLC4A7-208ENST00000437266 ARID3CA6NKF2 412 aa22.34■■□□□ 1.17
SLC4A7-208ENST00000437266 CCNB3Q8WWL7 1395 aa22.33■■□□□ 1.17
SLC4A7-208ENST00000437266 BCANQ96GW7 911 aa22.32■■□□□ 1.16
SLC4A7-208ENST00000437266 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
SLC4A7-208ENST00000437266 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
SLC4A7-208ENST00000437266 CARMIL1Q5VZK9 1371 aa22.25■■□□□ 1.15
SLC4A7-208ENST00000437266 RAB3GAP2Q9H2M9 1393 aa22.24■■□□□ 1.15
SLC4A7-208ENST00000437266 IGF1RP08069 1367 aa22.23■■□□□ 1.15
SLC4A7-208ENST00000437266 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
SLC4A7-208ENST00000437266 CFTRP13569 1480 aa22.16■■□□□ 1.14
SLC4A7-208ENST00000437266 ERICH3Q5RHP9 1530 aa22.14■■□□□ 1.14
SLC4A7-208ENST00000437266 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.13
SLC4A7-208ENST00000437266 FHOD3Q2V2M9 1422 aa22.12■■□□□ 1.13
SLC4A7-208ENST00000437266 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
SLC4A7-208ENST00000437266 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms