RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 NISCHQ9Y2I1 1504 aa47.75■■■■■ 5.23
CCDC130-209ENST00000588809 CCDC180Q9P1Z9 1646 aa42.81■■■■■ 4.44
CCDC130-209ENST00000588809 ABCC9O60706 1549 aa42.1■■■■■ 4.33
CCDC130-209ENST00000588809 RB1CC1Q8TDY2 1594 aa40.41■■■■■ 4.06
CCDC130-209ENST00000588809 NACADO15069 1562 aa40.26■■■■■ 4.04
CCDC130-209ENST00000588809 MYO15BQ96JP2 1530 aa39.91■■■■□ 3.98
CCDC130-209ENST00000588809 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
CCDC130-209ENST00000588809 ZCCHC6Q5VYS8 1495 aaKnown RBP39.69■■■■□ 3.94
CCDC130-209ENST00000588809 UNC13AQ9UPW8 1703 aa39.66■■■■□ 3.94
CCDC130-209ENST00000588809 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
CCDC130-209ENST00000588809 BICRAQ9NZM4 1560 aa39.25■■■■□ 3.87
CCDC130-209ENST00000588809 PABPN1Q86U42 306 aaKnown RBP eCLIP39.17■■■■□ 3.86
CCDC130-209ENST00000588809 DNAJC5BQ9UF47 199 aa39.04■■■■□ 3.84
CCDC130-209ENST00000588809 SCRIBQ14160 1630 aa38.88■■■■□ 3.81
CCDC130-209ENST00000588809 SHROOM4Q9ULL8 1493 aa38.81■■■■□ 3.8
CCDC130-209ENST00000588809 EIF4G1Q04637 1599 aaKnown RBP38.21■■■■□ 3.71
CCDC130-209ENST00000588809 CC2D2AQ9P2K1 1620 aa38.17■■■■□ 3.7
CCDC130-209ENST00000588809 CECR2Q9BXF3 1484 aa37.91■■■■□ 3.66
CCDC130-209ENST00000588809 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
CCDC130-209ENST00000588809 NCAPD3P42695 1498 aa37.11■■■■□ 3.53
CCDC130-209ENST00000588809 BAZ1AQ9NRL2 1556 aaPredicted RBP37.05■■■■□ 3.52
CCDC130-209ENST00000588809 ATAD2BQ9ULI0 1458 aa37.04■■■■□ 3.52
CCDC130-209ENST00000588809 SMARCA2P51531 1590 aa37.03■■■■□ 3.52
CCDC130-209ENST00000588809 HMGXB3Q12766 1538 aa36.95■■■■□ 3.51
CCDC130-209ENST00000588809 PEG3Q9GZU2 1588 aa36.89■■■■□ 3.5
CCDC130-209ENST00000588809 MROH2BQ7Z745 1585 aa36.77■■■■□ 3.48
CCDC130-209ENST00000588809 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
CCDC130-209ENST00000588809 WIZO95785 1651 aa36.4■■■■□ 3.42
CCDC130-209ENST00000588809 NESP48681 1621 aa36.33■■■■□ 3.41
CCDC130-209ENST00000588809 ERCC6Q03468 1493 aa36.32■■■■□ 3.41
CCDC130-209ENST00000588809 LAMC3Q9Y6N6 1575 aa36.27■■■■□ 3.4
CCDC130-209ENST00000588809 CUX2O14529 1486 aa36.2■■■■□ 3.39
CCDC130-209ENST00000588809 RSF1Q96T23 1441 aaPredicted RBP36.15■■■■□ 3.38
CCDC130-209ENST00000588809 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
CCDC130-209ENST00000588809 THOC2Q8NI27 1593 aaKnown RBP36.01■■■■□ 3.35
CCDC130-209ENST00000588809 TOP2AP11388 1531 aaKnown RBP35.97■■■■□ 3.35
CCDC130-209ENST00000588809 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
CCDC130-209ENST00000588809 PDS5BQ9NTI5 1447 aa35.93■■■■□ 3.34
CCDC130-209ENST00000588809 CFTRP13569 1480 aa35.69■■■■□ 3.3
CCDC130-209ENST00000588809 MRC2Q9UBG0 1479 aa35.62■■■■□ 3.29
CCDC130-209ENST00000588809 PRDM2Q13029 1718 aa35.6■■■■□ 3.29
CCDC130-209ENST00000588809 WDR62O43379 1518 aa35.59■■■■□ 3.29
CCDC130-209ENST00000588809 CEP164Q9UPV0 1460 aa35.57■■■■□ 3.28
CCDC130-209ENST00000588809 FANCD2Q9BXW9 1451 aa35.55■■■■□ 3.28
CCDC130-209ENST00000588809 DNAJC5Q9H3Z4 198 aa35.55■■■■□ 3.28
CCDC130-209ENST00000588809 CCDC88BA6NC98 1476 aa35.49■■■■□ 3.27
CCDC130-209ENST00000588809 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
CCDC130-209ENST00000588809 TOPBP1Q92547 1522 aa34.96■■■■□ 3.19
CCDC130-209ENST00000588809 ABCC8Q09428 1581 aa34.95■■■■□ 3.18
CCDC130-209ENST00000588809 DNMBPQ6XZF7 1577 aa34.92■■■■□ 3.18
CCDC130-209ENST00000588809 IFT140Q96RY7 1462 aa34.84■■■■□ 3.17
CCDC130-209ENST00000588809 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
CCDC130-209ENST00000588809 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.15
CCDC130-209ENST00000588809 SUPT5HO00267 1087 aaKnown RBP34.7■■■■□ 3.15
CCDC130-209ENST00000588809 EIF4G3O43432 1585 aaKnown RBP34.66■■■■□ 3.14
CCDC130-209ENST00000588809 POLA1P09884 1462 aaPredicted RBP34.63■■■■□ 3.13
CCDC130-209ENST00000588809 CUX1P39880 1505 aa34.54■■■■□ 3.12
CCDC130-209ENST00000588809 OSCARQ8IYS5 282 aa34.49■■■■□ 3.11
CCDC130-209ENST00000588809 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
CCDC130-209ENST00000588809 RAD54L2Q9Y4B4 1467 aa34.44■■■■□ 3.1
CCDC130-209ENST00000588809 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
CCDC130-209ENST00000588809 AQRO60306 1485 aaKnown RBP eCLIP34.42■■■■□ 3.12e-9■■■■□ 24.2
CCDC130-209ENST00000588809 SOGA1O94964 1423 aa34.41■■■■□ 3.1
CCDC130-209ENST00000588809 CHD1O14646 1710 aa34.35■■■■□ 3.09
CCDC130-209ENST00000588809 TDRD9Q8NDG6 1382 aaKnown RBP34.25■■■■□ 3.07
CCDC130-209ENST00000588809 BIVM-ERCC5R4GMW8 1640 aa34.21■■■■□ 3.07
CCDC130-209ENST00000588809 PBRM1Q86U86 1689 aa34.16■■■■□ 3.06
CCDC130-209ENST00000588809 TOP2BQ02880 1626 aa34.16■■■■□ 3.06
CCDC130-209ENST00000588809 RIMBP3CA6NJZ7 1639 aa34.15■■■■□ 3.06
CCDC130-209ENST00000588809 RIMBP3BA6NNM3 1639 aa34.15■■■■□ 3.06
CCDC130-209ENST00000588809 RIMBP3Q9UFD9 1639 aa34.15■■■■□ 3.06
CCDC130-209ENST00000588809 ABCA10Q8WWZ4 1543 aa34.14■■■■□ 3.06
CCDC130-209ENST00000588809 SNAPC4Q5SXM2 1469 aa34.13■■■■□ 3.05
CCDC130-209ENST00000588809 ABCA5Q8WWZ7 1642 aa34.12■■■■□ 3.05
CCDC130-209ENST00000588809 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
CCDC130-209ENST00000588809 MAGI1Q96QZ7 1491 aaPredicted RBP34.12■■■■□ 3.05
CCDC130-209ENST00000588809 SYNJ1O43426 1573 aa34.11■■■■□ 3.05
CCDC130-209ENST00000588809 WRNQ14191 1432 aaPredicted RBP eCLIP34.08■■■■□ 3.05
CCDC130-209ENST00000588809 TRIM41Q8WV44 630 aa34.06■■■■□ 3.04
CCDC130-209ENST00000588809 GAPVD1Q14C86 1478 aa34.06■■■■□ 3.04
CCDC130-209ENST00000588809 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
CCDC130-209ENST00000588809 FBLN2P98095 1184 aa33.99■■■■□ 3.03
CCDC130-209ENST00000588809 SYNJ2O15056 1496 aa33.97■■■■□ 3.03
CCDC130-209ENST00000588809 CLASP1Q7Z460 1538 aa33.93■■■■□ 3.02
CCDC130-209ENST00000588809 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
CCDC130-209ENST00000588809 ADAMTS12P58397 1594 aa33.8■■■■□ 3
CCDC130-209ENST00000588809 ERICH3Q5RHP9 1530 aa33.75■■■□□ 2.99
CCDC130-209ENST00000588809 ARAP1Q96P48 1450 aa33.72■■■□□ 2.99
CCDC130-209ENST00000588809 GRIN2AQ12879 1464 aa33.7■■■□□ 2.99
CCDC130-209ENST00000588809 FHAD1B1AJZ9 1412 aa33.63■■■□□ 2.97
CCDC130-209ENST00000588809 CYB5RLQ6IPT4 315 aa33.6■■■□□ 2.97
CCDC130-209ENST00000588809 CEP170Q5SW79 1584 aa33.59■■■□□ 2.97
CCDC130-209ENST00000588809 NUP160Q12769 1436 aa33.58■■■□□ 2.97
CCDC130-209ENST00000588809 SHROOM2Q13796 1616 aa33.48■■■□□ 2.95
CCDC130-209ENST00000588809 KIF27Q86VH2 1401 aa33.4■■■□□ 2.94
CCDC130-209ENST00000588809 CUL7Q14999 1698 aa33.39■■■□□ 2.94
CCDC130-209ENST00000588809 ERCC6L2Q5T890 1561 aa33.37■■■□□ 2.93
CCDC130-209ENST00000588809 RUSC2Q8N2Y8 1516 aa33.33■■■□□ 2.93
CCDC130-209ENST00000588809 IGF1RP08069 1367 aa33.31■■■□□ 2.92
CCDC130-209ENST00000588809 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms