RNA–Protein interactions for RNA: ENST00000507123.1

SH3TC1-211, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-211ENST00000507123 NISCHQ9Y2I1 1504 aa42.08■■■■■ 4.33
SH3TC1-211ENST00000507123 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
SH3TC1-211ENST00000507123 ABCC9O60706 1549 aa37.31■■■■□ 3.56
SH3TC1-211ENST00000507123 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
SH3TC1-211ENST00000507123 NACADO15069 1562 aa35.51■■■■□ 3.28
SH3TC1-211ENST00000507123 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
SH3TC1-211ENST00000507123 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
SH3TC1-211ENST00000507123 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
SH3TC1-211ENST00000507123 UNC13AQ9UPW8 1703 aa34.89■■■■□ 3.18
SH3TC1-211ENST00000507123 DCAF1Q9Y4B6 1507 aa34.81■■■■□ 3.16
SH3TC1-211ENST00000507123 PABPN1Q86U42 306 aaKnown RBP eCLIP34.73■■■■□ 3.15
SH3TC1-211ENST00000507123 DNAJC5BQ9UF47 199 aa34.72■■■■□ 3.15
SH3TC1-211ENST00000507123 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
SH3TC1-211ENST00000507123 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
SH3TC1-211ENST00000507123 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
SH3TC1-211ENST00000507123 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
SH3TC1-211ENST00000507123 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
SH3TC1-211ENST00000507123 CECR2Q9BXF3 1484 aa33.6■■■□□ 2.97
SH3TC1-211ENST00000507123 NCAPD3P42695 1498 aa32.78■■■□□ 2.84
SH3TC1-211ENST00000507123 SMARCA4P51532 1647 aa32.77■■■□□ 2.84
SH3TC1-211ENST00000507123 ATAD2BQ9ULI0 1458 aa32.71■■■□□ 2.83
SH3TC1-211ENST00000507123 SMARCA2P51531 1590 aa32.66■■■□□ 2.82
SH3TC1-211ENST00000507123 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
SH3TC1-211ENST00000507123 HMGXB3Q12766 1538 aa32.6■■■□□ 2.81
SH3TC1-211ENST00000507123 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
SH3TC1-211ENST00000507123 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
SH3TC1-211ENST00000507123 BAZ1BQ9UIG0 1483 aaKnown RBP32.4■■■□□ 2.78
SH3TC1-211ENST00000507123 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
SH3TC1-211ENST00000507123 NESP48681 1621 aa32.15■■■□□ 2.74
SH3TC1-211ENST00000507123 CUX2O14529 1486 aa32.09■■■□□ 2.73
SH3TC1-211ENST00000507123 WIZO95785 1651 aa32.03■■■□□ 2.72
SH3TC1-211ENST00000507123 LAMC3Q9Y6N6 1575 aa32■■■□□ 2.71
SH3TC1-211ENST00000507123 RSF1Q96T23 1441 aaPredicted RBP31.84■■■□□ 2.69
SH3TC1-211ENST00000507123 THOC2Q8NI27 1593 aaKnown RBP31.82■■■□□ 2.68
SH3TC1-211ENST00000507123 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
SH3TC1-211ENST00000507123 CADPSQ9ULU8 1353 aa31.77■■■□□ 2.68
SH3TC1-211ENST00000507123 KIF21AQ7Z4S6 1674 aa31.76■■■□□ 2.68
SH3TC1-211ENST00000507123 DNAJC5Q9H3Z4 198 aa31.68■■■□□ 2.66
SH3TC1-211ENST00000507123 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
SH3TC1-211ENST00000507123 MRC2Q9UBG0 1479 aa31.51■■■□□ 2.63
SH3TC1-211ENST00000507123 CFTRP13569 1480 aa31.5■■■□□ 2.63
SH3TC1-211ENST00000507123 WDR62O43379 1518 aa31.45■■■□□ 2.63
SH3TC1-211ENST00000507123 CEP164Q9UPV0 1460 aa31.43■■■□□ 2.62
SH3TC1-211ENST00000507123 FANCD2Q9BXW9 1451 aa31.41■■■□□ 2.62
SH3TC1-211ENST00000507123 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
SH3TC1-211ENST00000507123 PRDM2Q13029 1718 aa31.23■■■□□ 2.59
SH3TC1-211ENST00000507123 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
SH3TC1-211ENST00000507123 TOPBP1Q92547 1522 aa30.87■■■□□ 2.53
SH3TC1-211ENST00000507123 ABCC8Q09428 1581 aa30.8■■■□□ 2.52
SH3TC1-211ENST00000507123 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
SH3TC1-211ENST00000507123 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
SH3TC1-211ENST00000507123 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
SH3TC1-211ENST00000507123 TARBP1Q13395 1621 aaKnown RBP30.59■■■□□ 2.49
SH3TC1-211ENST00000507123 EIF4G3O43432 1585 aaKnown RBP30.59■■■□□ 2.49
SH3TC1-211ENST00000507123 OSCARQ8IYS5 282 aa30.58■■■□□ 2.49
SH3TC1-211ENST00000507123 POLA1P09884 1462 aaPredicted RBP30.57■■■□□ 2.48
SH3TC1-211ENST00000507123 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
SH3TC1-211ENST00000507123 CUX1P39880 1505 aa30.45■■■□□ 2.47
SH3TC1-211ENST00000507123 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.462e-6■■■■■ 29.8
SH3TC1-211ENST00000507123 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
SH3TC1-211ENST00000507123 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
SH3TC1-211ENST00000507123 SOGA1O94964 1423 aa30.39■■■□□ 2.46
SH3TC1-211ENST00000507123 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
SH3TC1-211ENST00000507123 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
SH3TC1-211ENST00000507123 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
SH3TC1-211ENST00000507123 CHD1O14646 1710 aa30.28■■■□□ 2.44
SH3TC1-211ENST00000507123 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
SH3TC1-211ENST00000507123 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
SH3TC1-211ENST00000507123 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
SH3TC1-211ENST00000507123 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
SH3TC1-211ENST00000507123 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
SH3TC1-211ENST00000507123 GRIN2BQ13224 1484 aa30.13■■■□□ 2.41
SH3TC1-211ENST00000507123 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
SH3TC1-211ENST00000507123 FBLN2P98095 1184 aa30.11■■■□□ 2.41
SH3TC1-211ENST00000507123 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
SH3TC1-211ENST00000507123 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
SH3TC1-211ENST00000507123 PBRM1Q86U86 1689 aa30.05■■■□□ 2.4
SH3TC1-211ENST00000507123 TOP2BQ02880 1626 aa30.05■■■□□ 2.4
SH3TC1-211ENST00000507123 BIVM-ERCC5R4GMW8 1640 aa30.05■■■□□ 2.4
SH3TC1-211ENST00000507123 GAPVD1Q14C86 1478 aa30.05■■■□□ 2.4
SH3TC1-211ENST00000507123 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.4
SH3TC1-211ENST00000507123 SYNJ2O15056 1496 aa30.01■■■□□ 2.4
SH3TC1-211ENST00000507123 SYNJ1O43426 1573 aa30.01■■■□□ 2.39
SH3TC1-211ENST00000507123 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
SH3TC1-211ENST00000507123 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
SH3TC1-211ENST00000507123 ARAP1Q96P48 1450 aa29.9■■■□□ 2.38
SH3TC1-211ENST00000507123 CYB5RLQ6IPT4 315 aa29.83■■■□□ 2.37
SH3TC1-211ENST00000507123 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
SH3TC1-211ENST00000507123 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
SH3TC1-211ENST00000507123 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
SH3TC1-211ENST00000507123 FHAD1B1AJZ9 1412 aa29.69■■■□□ 2.34
SH3TC1-211ENST00000507123 NUP160Q12769 1436 aa29.66■■■□□ 2.34
SH3TC1-211ENST00000507123 CEP170Q5SW79 1584 aa29.64■■■□□ 2.34
SH3TC1-211ENST00000507123 SHROOM2Q13796 1616 aa29.52■■■□□ 2.32
SH3TC1-211ENST00000507123 ERCC6L2Q5T890 1561 aa29.51■■■□□ 2.31
SH3TC1-211ENST00000507123 KIF27Q86VH2 1401 aa29.43■■■□□ 2.3
SH3TC1-211ENST00000507123 RUSC2Q8N2Y8 1516 aa29.39■■■□□ 2.3
SH3TC1-211ENST00000507123 IGF1RP08069 1367 aa29.38■■■□□ 2.29
SH3TC1-211ENST00000507123 TRHP20396 242 aaPredicted RBP29.37■■■□□ 2.29
SH3TC1-211ENST00000507123 CUL7Q14999 1698 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms