RNA–Protein interactions for RNA: ENST00000504822.1

SH3TC1-209, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-209ENST00000504822 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
SH3TC1-209ENST00000504822 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
SH3TC1-209ENST00000504822 ABCC9O60706 1549 aa32.72■■■□□ 2.83
SH3TC1-209ENST00000504822 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
SH3TC1-209ENST00000504822 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
SH3TC1-209ENST00000504822 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
SH3TC1-209ENST00000504822 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
SH3TC1-209ENST00000504822 NACADO15069 1562 aa31.92■■■□□ 2.7
SH3TC1-209ENST00000504822 RB1CC1Q8TDY2 1594 aa31.77■■■□□ 2.68
SH3TC1-209ENST00000504822 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
SH3TC1-209ENST00000504822 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
SH3TC1-209ENST00000504822 UNC13AQ9UPW8 1703 aa30.99■■■□□ 2.55
SH3TC1-209ENST00000504822 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
SH3TC1-209ENST00000504822 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
SH3TC1-209ENST00000504822 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
SH3TC1-209ENST00000504822 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
SH3TC1-209ENST00000504822 EIF4G1Q04637 1599 aaKnown RBP29.91■■■□□ 2.38
SH3TC1-209ENST00000504822 DNAJC5BQ9UF47 199 aa29.91■■■□□ 2.38
SH3TC1-209ENST00000504822 SMARCA4P51532 1647 aa29.89■■■□□ 2.37
SH3TC1-209ENST00000504822 MROH2BQ7Z745 1585 aa29.87■■■□□ 2.37
SH3TC1-209ENST00000504822 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
SH3TC1-209ENST00000504822 CC2D2AQ9P2K1 1620 aa29.61■■■□□ 2.33
SH3TC1-209ENST00000504822 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
SH3TC1-209ENST00000504822 SUPT5HO00267 1087 aaKnown RBP29.59■■■□□ 2.33
SH3TC1-209ENST00000504822 ATAD2BQ9ULI0 1458 aa29.59■■■□□ 2.33
SH3TC1-209ENST00000504822 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
SH3TC1-209ENST00000504822 WIZO95785 1651 aa29.56■■■□□ 2.32
SH3TC1-209ENST00000504822 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
SH3TC1-209ENST00000504822 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
SH3TC1-209ENST00000504822 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
SH3TC1-209ENST00000504822 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
SH3TC1-209ENST00000504822 CCDC88BA6NC98 1476 aa28.98■■■□□ 2.23
SH3TC1-209ENST00000504822 CADPSQ9ULU8 1353 aa28.66■■■□□ 2.18
SH3TC1-209ENST00000504822 CFTRP13569 1480 aa28.62■■■□□ 2.17
SH3TC1-209ENST00000504822 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
SH3TC1-209ENST00000504822 NESP48681 1621 aa28.51■■■□□ 2.15
SH3TC1-209ENST00000504822 PRDM2Q13029 1718 aa28.37■■■□□ 2.13
SH3TC1-209ENST00000504822 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
SH3TC1-209ENST00000504822 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
SH3TC1-209ENST00000504822 CEP164Q9UPV0 1460 aa28.19■■■□□ 2.1
SH3TC1-209ENST00000504822 KIF21AQ7Z4S6 1674 aa28.15■■■□□ 2.1
SH3TC1-209ENST00000504822 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
SH3TC1-209ENST00000504822 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
SH3TC1-209ENST00000504822 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
SH3TC1-209ENST00000504822 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
SH3TC1-209ENST00000504822 MRC2Q9UBG0 1479 aa28.02■■■□□ 2.08
SH3TC1-209ENST00000504822 CUX1P39880 1505 aa27.97■■■□□ 2.07
SH3TC1-209ENST00000504822 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
SH3TC1-209ENST00000504822 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
SH3TC1-209ENST00000504822 SYNJ1O43426 1573 aa27.93■■■□□ 2.06
SH3TC1-209ENST00000504822 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
SH3TC1-209ENST00000504822 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
SH3TC1-209ENST00000504822 THOC2Q8NI27 1593 aaKnown RBP27.91■■■□□ 2.06
SH3TC1-209ENST00000504822 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
SH3TC1-209ENST00000504822 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.06
SH3TC1-209ENST00000504822 WDR62O43379 1518 aa27.88■■■□□ 2.05
SH3TC1-209ENST00000504822 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
SH3TC1-209ENST00000504822 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
SH3TC1-209ENST00000504822 SOGA1O94964 1423 aa27.66■■■□□ 2.02
SH3TC1-209ENST00000504822 CUX2O14529 1486 aa27.64■■■□□ 2.02
SH3TC1-209ENST00000504822 RAD54L2Q9Y4B4 1467 aa27.62■■■□□ 2.01
SH3TC1-209ENST00000504822 IFT140Q96RY7 1462 aa27.59■■■□□ 2.01
SH3TC1-209ENST00000504822 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
SH3TC1-209ENST00000504822 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
SH3TC1-209ENST00000504822 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
SH3TC1-209ENST00000504822 KIF27Q86VH2 1401 aa27.43■■□□□ 1.98
SH3TC1-209ENST00000504822 TDRD9Q8NDG6 1382 aaKnown RBP27.41■■□□□ 1.98
SH3TC1-209ENST00000504822 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
SH3TC1-209ENST00000504822 EEA1Q15075 1411 aa27.4■■□□□ 1.98
SH3TC1-209ENST00000504822 ZNF608Q9ULD9 1512 aaPredicted RBP27.39■■□□□ 1.98
SH3TC1-209ENST00000504822 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
SH3TC1-209ENST00000504822 AQRO60306 1485 aaKnown RBP eCLIP27.34■■□□□ 1.972e-6■■■■■ 29.8
SH3TC1-209ENST00000504822 GAPVD1Q14C86 1478 aa27.34■■□□□ 1.97
SH3TC1-209ENST00000504822 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
SH3TC1-209ENST00000504822 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
SH3TC1-209ENST00000504822 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
SH3TC1-209ENST00000504822 DNAJC5Q9H3Z4 198 aa27.27■■□□□ 1.96
SH3TC1-209ENST00000504822 IGF1RP08069 1367 aa27.26■■□□□ 1.95
SH3TC1-209ENST00000504822 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
SH3TC1-209ENST00000504822 ERICH3Q5RHP9 1530 aa27.22■■□□□ 1.95
SH3TC1-209ENST00000504822 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
SH3TC1-209ENST00000504822 CARMIL1Q5VZK9 1371 aa27.11■■□□□ 1.93
SH3TC1-209ENST00000504822 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
SH3TC1-209ENST00000504822 SNAPC4Q5SXM2 1469 aa27.09■■□□□ 1.93
SH3TC1-209ENST00000504822 CUL7Q14999 1698 aa27.08■■□□□ 1.93
SH3TC1-209ENST00000504822 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
SH3TC1-209ENST00000504822 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
SH3TC1-209ENST00000504822 ADAMTS12P58397 1594 aa27.03■■□□□ 1.92
SH3TC1-209ENST00000504822 KIF21BO75037 1637 aa27.02■■□□□ 1.92
SH3TC1-209ENST00000504822 RAPGEF2Q9Y4G8 1499 aa27.02■■□□□ 1.92
SH3TC1-209ENST00000504822 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
SH3TC1-209ENST00000504822 GOLGA3Q08378 1498 aa26.94■■□□□ 1.9
SH3TC1-209ENST00000504822 CHMP7Q8WUX9 453 aaPredicted RBP26.93■■□□□ 1.9
SH3TC1-209ENST00000504822 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
SH3TC1-209ENST00000504822 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
SH3TC1-209ENST00000504822 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
SH3TC1-209ENST00000504822 FBLN2P98095 1184 aa26.87■■□□□ 1.89
SH3TC1-209ENST00000504822 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
SH3TC1-209ENST00000504822 CHD1O14646 1710 aa26.78■■□□□ 1.88
SH3TC1-209ENST00000504822 TNIKQ9UKE5 1360 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms