RNA–Protein interactions for RNA: ENST00000589096.1

CCDC130-210, Transcript of coiled-coil domain containing 130, humanhuman

Gene CCDC130, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-210ENST00000589096 NISCHQ9Y2I1 1504 aa46.64■■■■■ 5.06
CCDC130-210ENST00000589096 CCDC180Q9P1Z9 1646 aa41.77■■■■■ 4.28
CCDC130-210ENST00000589096 ABCC9O60706 1549 aa41.55■■■■■ 4.24
CCDC130-210ENST00000589096 RB1CC1Q8TDY2 1594 aa39.67■■■■□ 3.94
CCDC130-210ENST00000589096 NACADO15069 1562 aa39.46■■■■□ 3.91
CCDC130-210ENST00000589096 DCAF8L2P0C7V8 631 aa39.21■■■■□ 3.87
CCDC130-210ENST00000589096 MYO15BQ96JP2 1530 aa39.03■■■■□ 3.84
CCDC130-210ENST00000589096 DNAJC5BQ9UF47 199 aa38.81■■■■□ 3.8
CCDC130-210ENST00000589096 ZCCHC6Q5VYS8 1495 aaKnown RBP38.72■■■■□ 3.79
CCDC130-210ENST00000589096 PABPN1Q86U42 306 aaKnown RBP eCLIP38.71■■■■□ 3.79
CCDC130-210ENST00000589096 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
CCDC130-210ENST00000589096 DCAF1Q9Y4B6 1507 aa38.58■■■■□ 3.77
CCDC130-210ENST00000589096 BICRAQ9NZM4 1560 aa38.49■■■■□ 3.75
CCDC130-210ENST00000589096 SHROOM4Q9ULL8 1493 aa38.09■■■■□ 3.69
CCDC130-210ENST00000589096 SCRIBQ14160 1630 aa38.03■■■■□ 3.68
CCDC130-210ENST00000589096 CC2D2AQ9P2K1 1620 aa37.55■■■■□ 3.6
CCDC130-210ENST00000589096 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
CCDC130-210ENST00000589096 CECR2Q9BXF3 1484 aa37.45■■■■□ 3.59
CCDC130-210ENST00000589096 NCAPD3P42695 1498 aa36.44■■■■□ 3.42
CCDC130-210ENST00000589096 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
CCDC130-210ENST00000589096 SMARCA4P51532 1647 aa36.33■■■■□ 3.41
CCDC130-210ENST00000589096 SMARCA2P51531 1590 aa36.25■■■■□ 3.39
CCDC130-210ENST00000589096 BAZ1AQ9NRL2 1556 aaPredicted RBP36.2■■■■□ 3.39
CCDC130-210ENST00000589096 HMGXB3Q12766 1538 aa36.18■■■■□ 3.38
CCDC130-210ENST00000589096 PEG3Q9GZU2 1588 aa36.02■■■■□ 3.36
CCDC130-210ENST00000589096 BAZ1BQ9UIG0 1483 aaKnown RBP35.99■■■■□ 3.35
CCDC130-210ENST00000589096 MROH2BQ7Z745 1585 aa35.92■■■■□ 3.34
CCDC130-210ENST00000589096 ERCC6Q03468 1493 aa35.88■■■■□ 3.33
CCDC130-210ENST00000589096 CUX2O14529 1486 aa35.8■■■■□ 3.32
CCDC130-210ENST00000589096 NESP48681 1621 aa35.75■■■■□ 3.31
CCDC130-210ENST00000589096 LAMC3Q9Y6N6 1575 aa35.57■■■■□ 3.28
CCDC130-210ENST00000589096 DNAJC5Q9H3Z4 198 aa35.53■■■■□ 3.28
CCDC130-210ENST00000589096 WIZO95785 1651 aa35.46■■■■□ 3.27
CCDC130-210ENST00000589096 THOC2Q8NI27 1593 aaKnown RBP35.38■■■■□ 3.25
CCDC130-210ENST00000589096 PDS5BQ9NTI5 1447 aa35.37■■■■□ 3.25
CCDC130-210ENST00000589096 CADPSQ9ULU8 1353 aa35.34■■■■□ 3.25
CCDC130-210ENST00000589096 RSF1Q96T23 1441 aaPredicted RBP35.27■■■■□ 3.24
CCDC130-210ENST00000589096 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
CCDC130-210ENST00000589096 TOP2AP11388 1531 aaKnown RBP35.09■■■■□ 3.21
CCDC130-210ENST00000589096 MRC2Q9UBG0 1479 aa35.04■■■■□ 3.2
CCDC130-210ENST00000589096 CFTRP13569 1480 aa34.98■■■■□ 3.19
CCDC130-210ENST00000589096 WDR62O43379 1518 aa34.96■■■■□ 3.19
CCDC130-210ENST00000589096 CEP164Q9UPV0 1460 aa34.94■■■■□ 3.18
CCDC130-210ENST00000589096 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
CCDC130-210ENST00000589096 CCDC88BA6NC98 1476 aa34.67■■■■□ 3.14
CCDC130-210ENST00000589096 URB2Q14146 1524 aaKnown RBP34.6■■■■□ 3.13
CCDC130-210ENST00000589096 PRDM2Q13029 1718 aa34.57■■■■□ 3.12
CCDC130-210ENST00000589096 TOPBP1Q92547 1522 aa34.27■■■■□ 3.08
CCDC130-210ENST00000589096 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
CCDC130-210ENST00000589096 ABCC8Q09428 1581 aa34.24■■■■□ 3.07
CCDC130-210ENST00000589096 DNMBPQ6XZF7 1577 aa34.16■■■■□ 3.06
CCDC130-210ENST00000589096 OSCARQ8IYS5 282 aa34.16■■■■□ 3.06
CCDC130-210ENST00000589096 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
CCDC130-210ENST00000589096 TRIM41Q8WV44 630 aa34■■■■□ 3.03
CCDC130-210ENST00000589096 EIF4G3O43432 1585 aaKnown RBP33.97■■■■□ 3.03
CCDC130-210ENST00000589096 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.02
CCDC130-210ENST00000589096 TARBP1Q13395 1621 aaKnown RBP33.94■■■■□ 3.02
CCDC130-210ENST00000589096 AQRO60306 1485 aaKnown RBP eCLIP33.85■■■■□ 3.012e-9■■■■□ 24.2
CCDC130-210ENST00000589096 RAD54L2Q9Y4B4 1467 aa33.79■■■■□ 3
CCDC130-210ENST00000589096 SOGA1O94964 1423 aa33.79■■■■□ 3
CCDC130-210ENST00000589096 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
CCDC130-210ENST00000589096 FGD5Q6ZNL6 1462 aa33.75■■■□□ 2.99
CCDC130-210ENST00000589096 CUX1P39880 1505 aa33.74■■■□□ 2.99
CCDC130-210ENST00000589096 TDRD9Q8NDG6 1382 aaKnown RBP33.68■■■□□ 2.98
CCDC130-210ENST00000589096 WDR97A6NE52 1622 aa33.67■■■□□ 2.98
CCDC130-210ENST00000589096 RIMBP3CA6NJZ7 1639 aa33.67■■■□□ 2.98
CCDC130-210ENST00000589096 RIMBP3BA6NNM3 1639 aa33.67■■■□□ 2.98
CCDC130-210ENST00000589096 RIMBP3Q9UFD9 1639 aa33.67■■■□□ 2.98
CCDC130-210ENST00000589096 CHD1O14646 1710 aa33.63■■■□□ 2.97
CCDC130-210ENST00000589096 ARHGEF11O15085 1522 aa33.62■■■□□ 2.97
CCDC130-210ENST00000589096 FBLN2P98095 1184 aa33.57■■■□□ 2.96
CCDC130-210ENST00000589096 SNAPC4Q5SXM2 1469 aa33.53■■■□□ 2.96
CCDC130-210ENST00000589096 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
CCDC130-210ENST00000589096 MAGI1Q96QZ7 1491 aaPredicted RBP33.48■■■□□ 2.95
CCDC130-210ENST00000589096 ABCA10Q8WWZ4 1543 aa33.4■■■□□ 2.94
CCDC130-210ENST00000589096 CHMP7Q8WUX9 453 aaPredicted RBP33.39■■■□□ 2.94
CCDC130-210ENST00000589096 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
CCDC130-210ENST00000589096 SYNJ2O15056 1496 aa33.36■■■□□ 2.93
CCDC130-210ENST00000589096 CYB5RLQ6IPT4 315 aa33.33■■■□□ 2.93
CCDC130-210ENST00000589096 CLASP1Q7Z460 1538 aa33.32■■■□□ 2.92
CCDC130-210ENST00000589096 ABCA5Q8WWZ7 1642 aa33.31■■■□□ 2.92
CCDC130-210ENST00000589096 SYNJ1O43426 1573 aa33.31■■■□□ 2.92
CCDC130-210ENST00000589096 PBRM1Q86U86 1689 aa33.3■■■□□ 2.92
CCDC130-210ENST00000589096 ARAP1Q96P48 1450 aa33.3■■■□□ 2.92
CCDC130-210ENST00000589096 WRNQ14191 1432 aaPredicted RBP eCLIP33.29■■■□□ 2.92
CCDC130-210ENST00000589096 TOP2BQ02880 1626 aa33.26■■■□□ 2.91
CCDC130-210ENST00000589096 BIVM-ERCC5R4GMW8 1640 aa33.24■■■□□ 2.91
CCDC130-210ENST00000589096 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
CCDC130-210ENST00000589096 ADAMTS12P58397 1594 aa33.04■■■□□ 2.88
CCDC130-210ENST00000589096 ERICH3Q5RHP9 1530 aa32.98■■■□□ 2.87
CCDC130-210ENST00000589096 FHAD1B1AJZ9 1412 aa32.98■■■□□ 2.87
CCDC130-210ENST00000589096 NUP160Q12769 1436 aa32.95■■■□□ 2.87
CCDC130-210ENST00000589096 CEP170Q5SW79 1584 aa32.91■■■□□ 2.86
CCDC130-210ENST00000589096 TRHP20396 242 aaPredicted RBP32.88■■■□□ 2.85
CCDC130-210ENST00000589096 ERCC6L2Q5T890 1561 aa32.77■■■□□ 2.84
CCDC130-210ENST00000589096 SHROOM2Q13796 1616 aa32.76■■■□□ 2.83
CCDC130-210ENST00000589096 KIF27Q86VH2 1401 aa32.63■■■□□ 2.81
CCDC130-210ENST00000589096 IGF1RP08069 1367 aa32.59■■■□□ 2.81
CCDC130-210ENST00000589096 PRG4Q92954 1404 aaPredicted RBP32.59■■■□□ 2.81
CCDC130-210ENST00000589096 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms