Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-1Q9BYR8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-1Q9BYR8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP3-1Q9BYR8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-1Q9BYR8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC12.77□□□□□ -0.36
KRTAP3-1Q9BYR8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KRTAP3-1Q9BYR8 AC135983.2-203ENST00000454486 1613 ntBASIC12.77□□□□□ -0.36
KRTAP3-1Q9BYR8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC12.77□□□□□ -0.36
KRTAP3-1Q9BYR8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
KRTAP3-1Q9BYR8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP3-1Q9BYR8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
KRTAP3-1Q9BYR8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP3-1Q9BYR8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.77□□□□□ -0.37
KRTAP3-1Q9BYR8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-1Q9BYR8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-1Q9BYR8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-1Q9BYR8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-1Q9BYR8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.75□□□□□ -0.37
KRTAP3-1Q9BYR8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
KRTAP3-1Q9BYR8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-1Q9BYR8 AC136428.2-201ENST00000563187 214 ntBASIC12.75□□□□□ -0.37
KRTAP3-1Q9BYR8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP3-1Q9BYR8 WHAMMP2-203ENST00000563942 1603 ntBASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP3-1Q9BYR8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP3-1Q9BYR8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP3-1Q9BYR8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP3-1Q9BYR8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC12.71□□□□□ -0.37
KRTAP3-1Q9BYR8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
KRTAP3-1Q9BYR8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC12.71□□□□□ -0.37
KRTAP3-1Q9BYR8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC12.71□□□□□ -0.37
KRTAP3-1Q9BYR8 DUSP8P4-201ENST00000399538 1761 ntBASIC12.71□□□□□ -0.38
KRTAP3-1Q9BYR8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.71□□□□□ -0.38
KRTAP3-1Q9BYR8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KRTAP3-1Q9BYR8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 MIR762-201ENST00000390236 83 ntBASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-1Q9BYR8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 AC092803.2-201ENST00000564287 1899 ntBASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-1Q9BYR8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 AC097358.2-201ENST00000607541 1159 ntBASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-1Q9BYR8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms