Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61GP60059 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61GP60059 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SEC61GP60059 TMEM202-AS1-202ENST00000565181 2325 ntBASIC14.16□□□□□ -0.14
SEC61GP60059 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61GP60059 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61GP60059 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61GP60059 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SEC61GP60059 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SEC61GP60059 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61GP60059 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61GP60059 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61GP60059 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SEC61GP60059 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.15□□□□□ -0.14
SEC61GP60059 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC14.15□□□□□ -0.14
SEC61GP60059 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61GP60059 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61GP60059 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61GP60059 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61GP60059 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61GP60059 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61GP60059 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61GP60059 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61GP60059 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61GP60059 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61GP60059 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SEC61GP60059 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61GP60059 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61GP60059 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SEC61GP60059 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SEC61GP60059 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61GP60059 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61GP60059 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61GP60059 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61GP60059 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61GP60059 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC61GP60059 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61GP60059 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SEC61GP60059 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61GP60059 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61GP60059 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC61GP60059 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61GP60059 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61GP60059 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61GP60059 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61GP60059 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61GP60059 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC61GP60059 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC61GP60059 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC61GP60059 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61GP60059 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.09□□□□□ -0.15
SEC61GP60059 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SEC61GP60059 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SEC61GP60059 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61GP60059 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61GP60059 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SEC61GP60059 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SEC61GP60059 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SEC61GP60059 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61GP60059 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61GP60059 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61GP60059 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SEC61GP60059 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.08□□□□□ -0.16
SEC61GP60059 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC61GP60059 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SEC61GP60059 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SEC61GP60059 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC61GP60059 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61GP60059 SLC25A24-204ENST00000569674 2357 ntBASIC14.07□□□□□ -0.16
SEC61GP60059 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61GP60059 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61GP60059 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61GP60059 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61GP60059 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SEC61GP60059 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61GP60059 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61GP60059 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61GP60059 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61GP60059 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SEC61GP60059 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SEC61GP60059 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SEC61GP60059 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms