Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SEC61GP60059 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEC61GP60059 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61GP60059 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61GP60059 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61GP60059 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61GP60059 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61GP60059 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEC61GP60059 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61GP60059 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SEC61GP60059 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61GP60059 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61GP60059 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SEC61GP60059 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.48■□□□□ 0.55
SEC61GP60059 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61GP60059 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.38■□□□□ 0.53
SEC61GP60059 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61GP60059 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61GP60059 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61GP60059 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SEC61GP60059 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.2■□□□□ 0.5
SEC61GP60059 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61GP60059 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61GP60059 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SEC61GP60059 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SEC61GP60059 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SEC61GP60059 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEC61GP60059 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61GP60059 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SEC61GP60059 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61GP60059 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEC61GP60059 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEC61GP60059 AL161658.1-201ENST00000623641 1967 ntBASIC17.73■□□□□ 0.43
SEC61GP60059 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61GP60059 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61GP60059 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SEC61GP60059 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61GP60059 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61GP60059 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SEC61GP60059 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61GP60059 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61GP60059 AC139426.1-201ENST00000568218 2529 ntBASIC17.5■□□□□ 0.39
SEC61GP60059 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61GP60059 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEC61GP60059 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61GP60059 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEC61GP60059 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61GP60059 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SEC61GP60059 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61GP60059 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61GP60059 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61GP60059 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61GP60059 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61GP60059 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61GP60059 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEC61GP60059 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61GP60059 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61GP60059 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61GP60059 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC61GP60059 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61GP60059 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SEC61GP60059 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61GP60059 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61GP60059 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61GP60059 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61GP60059 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61GP60059 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61GP60059 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SEC61GP60059 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SEC61GP60059 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SEC61GP60059 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61GP60059 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SEC61GP60059 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SEC61GP60059 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61GP60059 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.94■□□□□ 0.3
SEC61GP60059 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61GP60059 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61GP60059 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SEC61GP60059 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC61GP60059 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC61GP60059 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61GP60059 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61GP60059 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61GP60059 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61GP60059 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61GP60059 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61GP60059 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SEC61GP60059 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61GP60059 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61GP60059 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61GP60059 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61GP60059 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SEC61GP60059 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61GP60059 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SEC61GP60059 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SEC61GP60059 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61GP60059 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SEC61GP60059 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC61GP60059 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16.64■□□□□ 0.25
SEC61GP60059 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms