Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS3P49746 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS3P49746 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS3P49746 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS3P49746 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
THBS3P49746 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.58■□□□□ 0.89
THBS3P49746 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
THBS3P49746 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THBS3P49746 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THBS3P49746 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.58■□□□□ 0.89
THBS3P49746 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.58■□□□□ 0.89
THBS3P49746 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.58■□□□□ 0.89
THBS3P49746 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THBS3P49746 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THBS3P49746 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
THBS3P49746 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
THBS3P49746 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.57■□□□□ 0.88
THBS3P49746 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
THBS3P49746 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
THBS3P49746 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
THBS3P49746 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.57■□□□□ 0.88
THBS3P49746 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
THBS3P49746 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.57■□□□□ 0.88
THBS3P49746 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.56■□□□□ 0.88
THBS3P49746 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.56■□□□□ 0.88
THBS3P49746 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS3P49746 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.56■□□□□ 0.88
THBS3P49746 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS3P49746 AC018358.1-201ENST00000631079 1402 ntBASIC20.56■□□□□ 0.88
THBS3P49746 ZNRF2P2-203ENST00000454624 420 ntBASIC20.56■□□□□ 0.88
THBS3P49746 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.56■□□□□ 0.88
THBS3P49746 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.56■□□□□ 0.88
THBS3P49746 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
THBS3P49746 DUX4L29-201ENST00000425409 679 ntBASIC20.55■□□□□ 0.88
THBS3P49746 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
THBS3P49746 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
THBS3P49746 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
THBS3P49746 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.54■□□□□ 0.88
THBS3P49746 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.54■□□□□ 0.88
THBS3P49746 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THBS3P49746 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
THBS3P49746 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
THBS3P49746 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
THBS3P49746 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THBS3P49746 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.53■□□□□ 0.88
THBS3P49746 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS3P49746 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.53■□□□□ 0.88
THBS3P49746 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS3P49746 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS3P49746 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
THBS3P49746 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.53■□□□□ 0.88
THBS3P49746 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THBS3P49746 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THBS3P49746 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THBS3P49746 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THBS3P49746 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THBS3P49746 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
THBS3P49746 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
THBS3P49746 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
THBS3P49746 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
THBS3P49746 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS3P49746 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
THBS3P49746 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS3P49746 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS3P49746 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
THBS3P49746 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.5■□□□□ 0.87
THBS3P49746 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS3P49746 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS3P49746 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS3P49746 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS3P49746 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS3P49746 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THBS3P49746 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
THBS3P49746 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THBS3P49746 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
THBS3P49746 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.48■□□□□ 0.87
THBS3P49746 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
THBS3P49746 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THBS3P49746 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
THBS3P49746 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS3P49746 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS3P49746 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.46■□□□□ 0.87
THBS3P49746 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS3P49746 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
THBS3P49746 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS3P49746 AC021231.2-201ENST00000594613 730 ntBASIC20.46■□□□□ 0.87
THBS3P49746 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS3P49746 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
THBS3P49746 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
THBS3P49746 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THBS3P49746 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
THBS3P49746 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
THBS3P49746 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THBS3P49746 HLA-V-202ENST00000446817 847 ntBASIC20.45■□□□□ 0.86
THBS3P49746 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THBS3P49746 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THBS3P49746 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
THBS3P49746 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THBS3P49746 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
THBS3P49746 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms