Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.87■□□□□ 0.772e-12■■■■■ 39.8
U2AF2P26368 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.672e-12■■■■■ 39.8
U2AF2P26368 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.052e-12■■■■■ 39.8
U2AF2P26368 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.852e-12■■■■■ 39.8
U2AF2P26368 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.69■□□□□ 0.262e-10■■■■■ 39.7
U2AF2P26368 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-10■■■■■ 39.7
U2AF2P26368 SPG11-212ENST00000558790 858 ntTSL 310.45□□□□□ -0.742e-10■■■■■ 39.7
U2AF2P26368 SPG11-209ENST00000558253 879 ntTSL 39.64□□□□□ -0.872e-10■■■■■ 39.7
U2AF2P26368 LPIN2-204ENST00000584915 491 ntTSL 36.84□□□□□ -1.312e-10■■■■■ 39.7
U2AF2P26368 SPG11-223ENST00000560858 447 ntTSL 52.81□□□□□ -1.962e-10■■■■■ 39.7
U2AF2P26368 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.498e-12■■■■■ 39.7
U2AF2P26368 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.458e-12■■■■■ 39.7
U2AF2P26368 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.68e-12■■■■■ 39.7
U2AF2P26368 SHTN1-206ENST00000497044 3647 ntTSL 23.35□□□□□ -1.878e-12■■■■■ 39.7
U2AF2P26368 ATXN2L-226ENST00000570284 701 ntTSL 517.8■□□□□ 0.441e-17■■■■■ 39.6
U2AF2P26368 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.132e-17■■■■■ 39.6
U2AF2P26368 PARG-204ENST00000610922 1487 ntTSL 218.77■□□□□ 0.591e-11■■■■■ 39.6
U2AF2P26368 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.26■□□□□ 0.195e-9■■■■■ 39.6
U2AF2P26368 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.9■□□□□ 0.145e-9■■■■■ 39.6
U2AF2P26368 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC15.4■□□□□ 0.065e-9■■■■■ 39.6
U2AF2P26368 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.011e-11■■■■■ 39.6
U2AF2P26368 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.135e-9■■■■■ 39.6
U2AF2P26368 PARG-201ENST00000402038 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.41e-11■■■■■ 39.6
U2AF2P26368 PARG-206ENST00000614063 3473 ntTSL 211.91□□□□□ -0.51e-11■■■■■ 39.6
U2AF2P26368 TRMT10B-204ENST00000488673 1443 ntTSL 1 (best)11.09□□□□□ -0.635e-9■■■■■ 39.6
U2AF2P26368 TRMT10B-206ENST00000537016 777 ntTSL 310.43□□□□□ -0.745e-9■■■■■ 39.6
U2AF2P26368 TRMT10B-208ENST00000538370 576 ntTSL 410.43□□□□□ -0.745e-9■■■■■ 39.6
U2AF2P26368 TRMT10B-209ENST00000540616 523 ntTSL 210.43□□□□□ -0.745e-9■■■■■ 39.6
U2AF2P26368 BTN2A1-207ENST00000541522 2845 ntTSL 2 BASIC13.01□□□□□ -0.331e-8■■■■■ 39.6
U2AF2P26368 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC11.17□□□□□ -0.621e-8■■■■■ 39.6
U2AF2P26368 BTN2A1-202ENST00000377600 2989 ntTSL 510.43□□□□□ -0.741e-8■■■■■ 39.6
U2AF2P26368 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC10.29□□□□□ -0.761e-8■■■■■ 39.6
U2AF2P26368 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.911e-8■■■■■ 39.6
U2AF2P26368 PAXBP1-208ENST00000472588 1410 ntTSL 1 (best)25.61■■□□□ 1.692e-7■■■■■ 39.6
U2AF2P26368 CPEB4-205ENST00000519152 441 ntTSL 38.29□□□□□ -1.086e-8■■■■■ 39.5
U2AF2P26368 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.813e-11■■■■■ 39.4
U2AF2P26368 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.432e-7■■■■■ 39.4
U2AF2P26368 LUC7L3-203ENST00000503728 783 ntTSL 52.22□□□□□ -2.058e-28■■■■■ 39.2
U2AF2P26368 LUC7L3-222ENST00000513969 419 ntTSL 30.58□□□□□ -2.328e-28■■■■■ 39.2
U2AF2P26368 PATJ-201ENST00000307297 1585 ntTSL 2 BASIC12.64□□□□□ -0.391e-7■■■■■ 39.1
U2AF2P26368 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.66■■□□□ 1.74e-7■■■■■ 39.1
U2AF2P26368 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.64e-7■■■■■ 39.1
U2AF2P26368 UPF3A-206ENST00000480362 965 ntTSL 520.21■□□□□ 0.834e-7■■■■■ 39.1
U2AF2P26368 UPF3A-203ENST00000474056 748 ntTSL 320.03■□□□□ 0.84e-7■■■■■ 39.1
U2AF2P26368 UPF3A-204ENST00000475218 1791 ntTSL 1 (best)15.71■□□□□ 0.114e-7■■■■■ 39.1
U2AF2P26368 UPF3A-210ENST00000493727 937 ntTSL 513.72□□□□□ -0.214e-7■■■■■ 39.1
U2AF2P26368 ATP7B-209ENST00000483772 723 ntTSL 58.31□□□□□ -1.083e-8■■■■■ 39.1
U2AF2P26368 HSPA8-219ENST00000532780 1194 ntTSL 220.45■□□□□ 0.862e-10■■■■■ 39
U2AF2P26368 HSPA8-212ENST00000528292 1112 ntTSL 26.78□□□□□ -1.322e-10■■■■■ 39
U2AF2P26368 HSPA8-216ENST00000532167 570 ntTSL 44.39□□□□□ -1.712e-10■■■■■ 39
U2AF2P26368 HSPA8-205ENST00000525463 583 ntTSL 54.03□□□□□ -1.762e-10■■■■■ 39
U2AF2P26368 BUB1-206ENST00000465029 1999 ntTSL 215.16■□□□□ 0.022e-19■■■■■ 39
U2AF2P26368 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-19■■■■■ 39
U2AF2P26368 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC10.59□□□□□ -0.712e-19■■■■■ 39
U2AF2P26368 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.23□□□□□ -1.092e-19■■■■■ 39
U2AF2P26368 BUB1-207ENST00000466333 2501 ntTSL 1 (best)6.76□□□□□ -1.332e-19■■■■■ 39
U2AF2P26368 PPM1B-203ENST00000378540 1703 ntTSL 226.73■■□□□ 1.876e-7■■■■■ 38.9
U2AF2P26368 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.56e-7■■■■■ 38.9
U2AF2P26368 PPM1B-210ENST00000487286 535 ntTSL 48.41□□□□□ -1.066e-7■■■■■ 38.9
U2AF2P26368 PPM1B-209ENST00000459690 676 ntTSL 24□□□□□ -1.776e-7■■■■■ 38.9
U2AF2P26368 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.246e-7■■■■■ 38.9
U2AF2P26368 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.126e-7■■■■■ 38.9
U2AF2P26368 RPL35A-208ENST00000485439 677 ntTSL 28.63□□□□□ -1.036e-7■■■■■ 38.9
U2AF2P26368 RPL35A-207ENST00000474640 687 ntTSL 28.01□□□□□ -1.136e-7■■■■■ 38.9
U2AF2P26368 RPL35A-203ENST00000439255 564 ntTSL 57.27□□□□□ -1.256e-7■■■■■ 38.9
U2AF2P26368 RPL35A-201ENST00000329092 456 ntTSL 36.23□□□□□ -1.416e-7■■■■■ 38.9
U2AF2P26368 RPL35A-204ENST00000442341 517 ntTSL 35.2□□□□□ -1.586e-7■■■■■ 38.9
U2AF2P26368 RPL35A-202ENST00000429437 442 ntTSL 55.08□□□□□ -1.66e-7■■■■■ 38.9
U2AF2P26368 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.71■■□□□ 1.554e-8■■■■■ 38.8
U2AF2P26368 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.06■□□□□ 0.84e-8■■■■■ 38.8
U2AF2P26368 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.7■□□□□ 0.744e-8■■■■■ 38.8
U2AF2P26368 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.7■□□□□ 0.744e-8■■■■■ 38.8
U2AF2P26368 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.324e-8■■■■■ 38.8
U2AF2P26368 TPM1-230ENST00000561266 671 ntTSL 315.69■□□□□ 0.14e-8■■■■■ 38.8
U2AF2P26368 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.59■□□□□ 0.094e-8■■■■■ 38.8
U2AF2P26368 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.41■□□□□ 0.064e-8■■■■■ 38.8
U2AF2P26368 TPM1-227ENST00000560970 1039 ntTSL 1 (best)11.98□□□□□ -0.494e-8■■■■■ 38.8
U2AF2P26368 TPM1-221ENST00000559831 573 ntTSL 511.94□□□□□ -0.54e-8■■■■■ 38.8
U2AF2P26368 TPM1-231ENST00000561395 673 ntTSL 58.66□□□□□ -1.024e-8■■■■■ 38.8
U2AF2P26368 ATP13A3-208ENST00000485194 586 ntTSL 52.91□□□□□ -1.946e-11■■■■■ 38.7
U2AF2P26368 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.973e-8■■■■■ 38.7
U2AF2P26368 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.54■□□□□ 0.44e-8■■■■■ 38.7
U2AF2P26368 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.343e-8■■■■■ 38.7
U2AF2P26368 SF1-211ENST00000448404 2778 ntTSL 1 (best)17.08■□□□□ 0.333e-8■■■■■ 38.7
U2AF2P26368 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.68■□□□□ 0.263e-8■■■■■ 38.7
U2AF2P26368 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.61■□□□□ 0.253e-8■■■■■ 38.7
U2AF2P26368 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.053e-8■■■■■ 38.7
U2AF2P26368 MKLN1-207ENST00000468830 563 ntTSL 24.09□□□□□ -1.751e-12■■■■■ 38.7
U2AF2P26368 MKLN1-212ENST00000498778 3380 ntTSL 1 (best)3.43□□□□□ -1.861e-12■■■■■ 38.7
U2AF2P26368 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.372e-9■■■■■ 38.7
U2AF2P26368 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.65■□□□□ 0.262e-9■■■■■ 38.7
U2AF2P26368 HSPH1-206ENST00000602786 3488 ntTSL 1 (best)16.65■□□□□ 0.262e-9■■■■■ 38.7
U2AF2P26368 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC14.88□□□□□ -0.032e-9■■■■■ 38.7
U2AF2P26368 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC12.62□□□□□ -0.392e-9■■■■■ 38.7
U2AF2P26368 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16■□□□□ 0.151e-7■■■■■ 38.7
U2AF2P26368 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC10.34□□□□□ -0.753e-30■■■■■ 38.6
U2AF2P26368 EHMT1-246ENST00000637748 2006 ntTSL 524.15■■□□□ 1.466e-8■■■■■ 38.5
U2AF2P26368 EHMT1-217ENST00000494249 2038 ntTSL 1 (best)22.59■■□□□ 1.216e-8■■■■■ 38.5
U2AF2P26368 EHMT1-232ENST00000636463 100 ntTSL 59.87□□□□□ -0.836e-8■■■■■ 38.5
U2AF2P26368 EHMT1-227ENST00000635987 100 ntTSL 58.68□□□□□ -1.026e-8■■■■■ 38.5
Retrieved 100 of 36,523 protein–RNA pairs in 108.4 ms