RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
SHTN1-207ENST00000615301 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
SHTN1-207ENST00000615301 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
SHTN1-207ENST00000615301 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
SHTN1-207ENST00000615301 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
SHTN1-207ENST00000615301 TTBK1Q5TCY1 1321 aaPredicted RBP15.52■□□□□ 0.08
SHTN1-207ENST00000615301 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
SHTN1-207ENST00000615301 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
SHTN1-207ENST00000615301 APLP2Q06481 763 aa15.33■□□□□ 0.04
SHTN1-207ENST00000615301 ERICH6Q7L0X2 663 aa15.3■□□□□ 0.04
SHTN1-207ENST00000615301 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
SHTN1-207ENST00000615301 RANGAP1P46060 587 aaPredicted RBP15.14■□□□□ 0.01
SHTN1-207ENST00000615301 YTHDC1Q96MU7 727 aaKnown RBP15.13■□□□□ 0.01
SHTN1-207ENST00000615301 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
SHTN1-207ENST00000615301 NISCHQ9Y2I1 1504 aa15.05■□□□□ -0
SHTN1-207ENST00000615301 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
SHTN1-207ENST00000615301 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
SHTN1-207ENST00000615301 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
SHTN1-207ENST00000615301 NEFLP07196 543 aa14.87□□□□□ -0.03
SHTN1-207ENST00000615301 MYT1Q01538 1121 aa14.85□□□□□ -0.03
SHTN1-207ENST00000615301 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
SHTN1-207ENST00000615301 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
SHTN1-207ENST00000615301 HRCP23327 699 aa14.62□□□□□ -0.07
SHTN1-207ENST00000615301 CNGB1Q14028 1251 aaPredicted RBP14.55□□□□□ -0.08
SHTN1-207ENST00000615301 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.08
SHTN1-207ENST00000615301 POLR3GLQ9BT43 218 aa14.51□□□□□ -0.09
SHTN1-207ENST00000615301 ITGAEP38570 1179 aa14.5□□□□□ -0.09
SHTN1-207ENST00000615301 DAXXQ9UER7 740 aaPredicted RBP14.49□□□□□ -0.09
SHTN1-207ENST00000615301 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
SHTN1-207ENST00000615301 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
SHTN1-207ENST00000615301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
SHTN1-207ENST00000615301 BCANQ96GW7 911 aa14.27□□□□□ -0.13
SHTN1-207ENST00000615301 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
SHTN1-207ENST00000615301 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
SHTN1-207ENST00000615301 GTF3C3Q9Y5Q9 886 aa14.19□□□□□ -0.14
SHTN1-207ENST00000615301 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
SHTN1-207ENST00000615301 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
SHTN1-207ENST00000615301 CLSPNQ9HAW4 1339 aa14.17□□□□□ -0.14
SHTN1-207ENST00000615301 CHIC1Q5VXU3 224 aa14.16□□□□□ -0.14
SHTN1-207ENST00000615301 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
SHTN1-207ENST00000615301 NEUROD1Q13562 356 aa14□□□□□ -0.17
SHTN1-207ENST00000615301 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
SHTN1-207ENST00000615301 BCL11AQ9H165 835 aa13.93□□□□□ -0.18
SHTN1-207ENST00000615301 CDK11AQ9UQ88 783 aaPredicted RBP13.92□□□□□ -0.18
SHTN1-207ENST00000615301 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
SHTN1-207ENST00000615301 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
SHTN1-207ENST00000615301 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
SHTN1-207ENST00000615301 ANP32CO43423 234 aa13.83□□□□□ -0.19
SHTN1-207ENST00000615301 EIF5BO60841 1220 aaKnown RBP13.82□□□□□ -0.2
SHTN1-207ENST00000615301 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
SHTN1-207ENST00000615301 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
SHTN1-207ENST00000615301 ANP32AP39687 249 aaKnown RBP13.7□□□□□ -0.22
SHTN1-207ENST00000615301 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
SHTN1-207ENST00000615301 FKBP8Q14318 412 aa13.68□□□□□ -0.22
SHTN1-207ENST00000615301 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
SHTN1-207ENST00000615301 NBR1Q14596 966 aa13.6□□□□□ -0.23
SHTN1-207ENST00000615301 ARID3CA6NKF2 412 aa13.58□□□□□ -0.23
SHTN1-207ENST00000615301 ARXQ96QS3 562 aa13.58□□□□□ -0.24
SHTN1-207ENST00000615301 P3H3Q8IVL6 736 aa13.53□□□□□ -0.24
SHTN1-207ENST00000615301 SALL2Q9Y467 1007 aaPredicted RBP13.53□□□□□ -0.24
SHTN1-207ENST00000615301 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
SHTN1-207ENST00000615301 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
SHTN1-207ENST00000615301 FAM9BQ8IZU0 186 aa13.5□□□□□ -0.25
SHTN1-207ENST00000615301 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
SHTN1-207ENST00000615301 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
SHTN1-207ENST00000615301 IRX6P78412 446 aaPredicted RBP13.47□□□□□ -0.25
SHTN1-207ENST00000615301 ANP32BQ92688 251 aaKnown RBP13.45□□□□□ -0.26
SHTN1-207ENST00000615301 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHTN1-207ENST00000615301 NEFMP07197 916 aa13.43□□□□□ -0.26
SHTN1-207ENST00000615301 FBLN2P98095 1184 aa13.43□□□□□ -0.26
SHTN1-207ENST00000615301 ZNF777Q9ULD5 760 aaPredicted RBP13.4□□□□□ -0.26
SHTN1-207ENST00000615301 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
SHTN1-207ENST00000615301 GLIPR1L2Q4G1C9 344 aa13.37□□□□□ -0.27
SHTN1-207ENST00000615301 MIER1Q8N108 512 aa13.35□□□□□ -0.27
SHTN1-207ENST00000615301 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
SHTN1-207ENST00000615301 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
SHTN1-207ENST00000615301 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
SHTN1-207ENST00000615301 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
SHTN1-207ENST00000615301 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
SHTN1-207ENST00000615301 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
SHTN1-207ENST00000615301 TMC1Q8TDI8 760 aa13.26□□□□□ -0.29
SHTN1-207ENST00000615301 MRS2Q9HD23 443 aa13.26□□□□□ -0.29
SHTN1-207ENST00000615301 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
SHTN1-207ENST00000615301 CHIC2Q9UKJ5 165 aa13.23□□□□□ -0.29
SHTN1-207ENST00000615301 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.3
SHTN1-207ENST00000615301 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
SHTN1-207ENST00000615301 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
SHTN1-207ENST00000615301 ANP32EQ9BTT0 268 aa13.17□□□□□ -0.3
SHTN1-207ENST00000615301 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
SHTN1-207ENST00000615301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.319e-7■□□□□ 10.6
SHTN1-207ENST00000615301 SENP3Q9H4L4 574 aaPredicted RBP13.14□□□□□ -0.31
SHTN1-207ENST00000615301 ABCC9O60706 1549 aa13.13□□□□□ -0.31
SHTN1-207ENST00000615301 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
SHTN1-207ENST00000615301 LAS1LQ9Y4W2 734 aaKnown RBP13.11□□□□□ -0.31
SHTN1-207ENST00000615301 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
SHTN1-207ENST00000615301 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
SHTN1-207ENST00000615301 SUPT16HQ9Y5B9 1047 aaKnown RBP13.09□□□□□ -0.31
SHTN1-207ENST00000615301 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
SHTN1-207ENST00000615301 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
SHTN1-207ENST00000615301 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms