RNA–Protein interactions for RNA: ENST00000474640.1

RPL35A-207, Transcript of ribosomal protein L35a, humanhuman

TSL 2

Gene RPL35A, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-207ENST00000474640 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
RPL35A-207ENST00000474640 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
RPL35A-207ENST00000474640 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
RPL35A-207ENST00000474640 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
RPL35A-207ENST00000474640 FOXD1Q16676 465 aa18.16■□□□□ 0.5
RPL35A-207ENST00000474640 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
RPL35A-207ENST00000474640 MSH5O43196 834 aa17.22■□□□□ 0.35
RPL35A-207ENST00000474640 PIAS4Q8N2W9 510 aaPredicted RBP16.85■□□□□ 0.29
RPL35A-207ENST00000474640 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
RPL35A-207ENST00000474640 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
RPL35A-207ENST00000474640 NISCHQ9Y2I1 1504 aa16.52■□□□□ 0.24
RPL35A-207ENST00000474640 ADRA2BP18089 450 aa16.49■□□□□ 0.23
RPL35A-207ENST00000474640 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.04
RPL35A-207ENST00000474640 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
RPL35A-207ENST00000474640 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
RPL35A-207ENST00000474640 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
RPL35A-207ENST00000474640 DCAF8L1A6NGE4 600 aa14.74□□□□□ -0.05
RPL35A-207ENST00000474640 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
RPL35A-207ENST00000474640 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
RPL35A-207ENST00000474640 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
RPL35A-207ENST00000474640 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
RPL35A-207ENST00000474640 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
RPL35A-207ENST00000474640 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
RPL35A-207ENST00000474640 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
RPL35A-207ENST00000474640 KCNA4P22459 653 aa14.27□□□□□ -0.13
RPL35A-207ENST00000474640 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
RPL35A-207ENST00000474640 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
RPL35A-207ENST00000474640 ABCC9O60706 1549 aa14.06□□□□□ -0.16
RPL35A-207ENST00000474640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
RPL35A-207ENST00000474640 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
RPL35A-207ENST00000474640 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
RPL35A-207ENST00000474640 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
RPL35A-207ENST00000474640 POTEHQ6S545 545 aa13.75□□□□□ -0.21
RPL35A-207ENST00000474640 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
RPL35A-207ENST00000474640 DCAF1Q9Y4B6 1507 aa13.68□□□□□ -0.22
RPL35A-207ENST00000474640 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
RPL35A-207ENST00000474640 NACADO15069 1562 aa13.66□□□□□ -0.22
RPL35A-207ENST00000474640 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
RPL35A-207ENST00000474640 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
RPL35A-207ENST00000474640 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
RPL35A-207ENST00000474640 DSG3P32926 999 aa13.52□□□□□ -0.25
RPL35A-207ENST00000474640 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
RPL35A-207ENST00000474640 CAPN15O75808 1086 aa13.49□□□□□ -0.25
RPL35A-207ENST00000474640 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
RPL35A-207ENST00000474640 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
RPL35A-207ENST00000474640 UNC13AQ9UPW8 1703 aa13.24□□□□□ -0.29
RPL35A-207ENST00000474640 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPL35A-207ENST00000474640 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
RPL35A-207ENST00000474640 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
RPL35A-207ENST00000474640 ZBTB22O15209 634 aa13.17□□□□□ -0.3
RPL35A-207ENST00000474640 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
RPL35A-207ENST00000474640 APLP2Q06481 763 aa13.14□□□□□ -0.31
RPL35A-207ENST00000474640 ABCB7O75027 752 aa13.12□□□□□ -0.31
RPL35A-207ENST00000474640 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
RPL35A-207ENST00000474640 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
RPL35A-207ENST00000474640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
RPL35A-207ENST00000474640 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
RPL35A-207ENST00000474640 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
RPL35A-207ENST00000474640 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
RPL35A-207ENST00000474640 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
RPL35A-207ENST00000474640 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
RPL35A-207ENST00000474640 CECR2Q9BXF3 1484 aa12.84□□□□□ -0.35
RPL35A-207ENST00000474640 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
RPL35A-207ENST00000474640 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.36
RPL35A-207ENST00000474640 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
RPL35A-207ENST00000474640 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
RPL35A-207ENST00000474640 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
RPL35A-207ENST00000474640 POLA2Q14181 598 aa12.69□□□□□ -0.38
RPL35A-207ENST00000474640 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
RPL35A-207ENST00000474640 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
RPL35A-207ENST00000474640 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
RPL35A-207ENST00000474640 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
RPL35A-207ENST00000474640 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
RPL35A-207ENST00000474640 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
RPL35A-207ENST00000474640 WIZO95785 1651 aa12.57□□□□□ -0.4
RPL35A-207ENST00000474640 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
RPL35A-207ENST00000474640 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
RPL35A-207ENST00000474640 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
RPL35A-207ENST00000474640 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
RPL35A-207ENST00000474640 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
RPL35A-207ENST00000474640 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
RPL35A-207ENST00000474640 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
RPL35A-207ENST00000474640 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
RPL35A-207ENST00000474640 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
RPL35A-207ENST00000474640 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
RPL35A-207ENST00000474640 HAX1O00165 279 aa12.36□□□□□ -0.43
RPL35A-207ENST00000474640 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
RPL35A-207ENST00000474640 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
RPL35A-207ENST00000474640 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
RPL35A-207ENST00000474640 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
RPL35A-207ENST00000474640 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
RPL35A-207ENST00000474640 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
RPL35A-207ENST00000474640 FKBP8Q14318 412 aa12.28□□□□□ -0.44
RPL35A-207ENST00000474640 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
RPL35A-207ENST00000474640 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
RPL35A-207ENST00000474640 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPL35A-207ENST00000474640 CFTRP13569 1480 aa12.24□□□□□ -0.45
RPL35A-207ENST00000474640 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
RPL35A-207ENST00000474640 NESP48681 1621 aa12.22□□□□□ -0.45
RPL35A-207ENST00000474640 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms